Detailed Transcription Factor table

ID Superfamilyfamily Query sequence All genes in SuperfamilyAll detected genes (Phase1)Primarily detected genes (Phase2)
TF_1_1 MYB superfamily CAPRICE BAA21917 238 1364
TF_1_2 LHY CAA07004 2298
TF_1_3 WEREWOLF AAF18939 17012
TF_1_4 ATR1 AAC16897 18041
TF_1_5 GL1 AAC97387 14695
TF_1_6 CIRCADIAN CLOCK ASSOCIATED 1 AAB40525 22729
TF_2_1 AP2/EREBP ABSCISIC ACID-INSENSITIVE4 AAC39489 145 1442
TF_2_2 AINTEGUMENTA AAB17364 14525
TF_2_3 APETALA2 AAC13770 14418
TF_2_4 CBF1 NP_172721 14539
TF_2_5 DREB2A BAA33794 1379
TF_3_1 bHLH LONG HYPOCOTYL IN FAR-RED1 AAG40617 157 13838
TF_3_2 TRANSPARENT TESTA8 Q9FT81 141106
TF_3_3 checked group 1313
TF_4 NAC CUP-SHAPED COTYLEDON2 BAA19529 106 106106
TF_5_1 C2H2(Zn) FIS2 AAD09104 177 77
TF_5_2 SUPERMAN AAC49116 650
TF_5_3 InterPro C2H2 171170
TF_6_1 HB ATHB-2 Q05466 101 9019
TF_6_2 BELL1 A57632 2413
TF_6_3 GLABRA2 P46607 716
TF_6_4 REVOLUTA/INTERFASCICULAR FIBERLESS1 AAF42938 7312
TF_6_5 SHOOTMERISTEMLESS Q38874 249
TF_6_6 WUSCHEL CAA09986 6310
TF_6_7 ANTHOCYANINLESS2 AAD47139 9628
TF_7_1 MADS PISTILLATA P48007 106 1048
TF_7_2 SHORT VEGETATIVE PHASE Q9FVC1 10511
TF_7_3 SOC1 O64645 10311
TF_7_4 SHATTERPROOF1 AAM64275 1057
TF_7_5 AGAMOUS P17839 10511
TF_7_6 SEPALLATA1 CAC83066 10513
TF_7_7 FRUITFULL Q38876 1055
TF_7_8 FLOWERING LOCUS C AAN04056 1056
TF_7_9 CAULIFLOWER AAA64789 1059
TF_7_10 APETALA3 A42095 1049
TF_7_11 APETALA1 P35631 10510
TF_7_12 ANR1 CAB09793 1056
TF_8_1 bZIP ABSCISIC ACID-INSENSITIVE5 AAD21438 75 7343
TF_8_3 PERIANTHIA AAD19660 7112
TF_8_4 checked group 22
TF_9 WRKY(Zn) S72443 72 7272
TF_10_1 GARP G2-like AAD55941 57 5538
TF_10_2 ARR-B class BAA74528 5713
TF_11_1 C2C2(Zn) Dof CAA66600 126 3333
TF_11_2 CO-like A56133 5151
TF_11_3 GATA AAB61058 3737
TF_11_4 YABBY AAD30526 55
TF_12_1 CCAAT HAP2 type A26771 37 1010
TF_12_2 HAP3 type P13434 139
TF_12_3 HAP4 type S37936 00
TF_12_4 HAP5 type Q02516 2714
TF_12_5 Dr1 AAB51375 134
TF_13_1 GRAS SHORT-ROOT AAF75234 32 324
TF_13_2 SCARECROW AAB06318 3215
TF_13_3 Repressor of ga-1 BAC41902 316
TF_13_4 PAT1 AAF73237 327
TF_13_5 Gibberelin Insensitive CAB51557 320
TF_14 Trihelix S39484 31 3131
TF_15 HSF CAB63801 27 2727
TF_16 TCP AAC26786 24 2424
TF_17_1 ARF MONOPTEROS/ARF5 P93024 119 7422
TF_17_2 NPH4/ARF7 AAF71831 11937
TF_17_3 ETTIN/ARF3 T03278 4513
TF_18 C3H-type 1(Zn) putative zinc finger protein NP_176987 38 3837
TF_19 C3H-type 2(Zn) CAA65242 10 1010
TF_20 SBP CAB56581 17 1717
TF_21 Nin-like CAB61243 14 1414
TF_22_1 ABI3/VP1 FUSCA3 AAC35247 112 9518
TF_22_2 ABSCISIC ACID-INSENSITIVE3 CAA05484 11233
TF_23 TUB AAC28518 11 1111
TF_24_1 E2F/DP O00716 8 86
TF_24_2 Q64163 22
TF_25 CPP(ZN) CAA09028 11 118
TF_26 Alfin-like AAA20093 60 6047
TF_27 EIL AAC49749 6 66
TF_28 LFY AAA32826 3 33
TF_29_1 Other HUA2 AAD31171 27 1815
TF_29_2 NPR1 AAC49611 77
TF_29_3 STERILE APETALA CAA11128 11
TF_29_4 SPOROCYTELESS/NOZZLE AAD45344 11
TF_30 NHR(C8)(Zn) CAA31709 0 00
TF_31 Adf-1 AAA28325 0 00
TF_32 T-BOX AAB32396 0 00
TF_33 ETS CAA33195 0 00
TF_34 DM(Zn) AAA17840 0 00
TF_35 PAIRED(w/o HB) AAF47314 88 882
TF_36 Runt/CBF CAA39817 0 00
TF_37 NF-kB/Rel/dorsal AAA28465 0 00
TF_38 Smad BAA76956 0 00
TF_39 NTF-1/grainyhead CAA33692 0 00
TF_40 STAT AAC46984 0 00
TF_41 AP-2 CAA36842 0 00
TF_42 Olf-1/EBF AAA41759 0 00
TF_43 TSC-22/Dip/Bun AAC41607 0 00
TF_44 NF-I CAA35853 0 00
TF_45 p53 CAA42629 0 00
TF_46 brinker BAA76710 0 00
TF_47 C6(Zn) CAA31088 0 00
TF_48 Swi4/Swi6 Q91YU8 1 11
TF_49 Copper fist AAA66313 0 00
TF_51 ABF1/AZF1 CAA81951 0 00
TF_52 RAP1 AAA18404 0 00
TF_53 Fork head CAA46889 0 00
TF_54 RFX NP_002909 0 00
TF_55 Aux/IAA AAC39440 49 4921
TF_56 HMG-box BAA02719 15 1511
TF_57 ARID AAC62899 6 66
TF_58 JUMONJI T30254 15 1513
TF_59_1 PcG; E(z) class CURLY LEAF CAA71599 33 3320
TF_59_2 MEDEA AAC39446 3212
TF_60 PcG; Esc class FERTILIZATION-INDEPENDENT ENDOSPERM AAD23584 3 33
TF_61 CBF Q08024 0 00
TF_62 CBF5 O13473 2 22
TF_63 SW13 AAO42112 11 116
TF_64 TGA3 S46523 82 8227
TF_65 Pti4 T07686 127 1275
TF_66 Pti5 T07689 144 1445
TF_67 Pti6 T07728 146 14618
TF_68 ERF BAB62912 146 14619
TF_69 PHD-finger CAC69664 10 1010
TF_72 VIP3 CAB75507 1 11
TF_73 LIM-domain NP_680133 6 66
TF_74 AT-hook NP_565769 31 3131
TF_75 Sir2 NP_200387 2 22
TF_other 40 4040
TF_GTF 17 1717
Total: 65601968

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