ID:TF_1_6

Phase1: All genes detected as TF_1_6 (227 genes).

Super Family:MYB superfamily
Sub Family:CIRCADIAN CLOCK ASSOCIATED 1
Query sequence of this family
Link to serched gene: At2g42660

Gene codeGene name ScoreE-value RAFLTransposon Mutants Microarray Genome map Alternative splicing check result
At2g46830 CCA1 781 0.0 RAFL MAP o
At1g01060 DNA-binding protein, putative 608 e-174 RAFL Mutants MAP Alternative splicing o
At4g25560 myb like protein 153 2e-37 MAP o
At5g23650 putative protein 152 4e-37 MAP o
At1g19000 unknown protein 150 2e-36 RAFL MAP Alternative splicing o
At4g01280 putative myb-related DNA-binding protein 149 4e-36 RAFL Mutants MAP o
At4g21440 myb-related protein M4 145 7e-35 RAFL Mutants MAP o
At5g16770 putative transcription factor (MYB9) 142 4e-34 MAP o
At5g10280 putative transcription factor MYB92 142 5e-34 RAFL Mutants MAP Alternative splicing o
At5g26660 ATMYB4 (Atmyb4) 140 2e-33 RAFL MAP o
At1g68320 putative transcription factor (MYB62) 138 8e-33 MAP o
At1g63910 putative MYB family transcription factor 138 1e-32 RAFL MAP o
At3g13890 putative transcription factor (MYB26) 138 1e-32 MAP o
At2g42660 putative protein 137 2e-32 MAP o
At5g11050 putative transcription factor MYB64 (MYB64) 136 4e-32 Mutants MAP o
At3g23250 myb-related transcription factor, putative 135 7e-32 RAFL MAP o
At5g58850 putative transcription factor MYB119 (MYB119) 131 2e-30 MAP o
At1g09540 putative transcription factor (MYB61) 130 2e-30 RAFL Mutants MAP o
At5g65230 transcription factor-like protein 127 2e-29 MAP o
At5g54230 Myb-related transcription factor-like protein 127 2e-29 RAFL MAP o
At1g79180 putative transcription factor (MYB63) 126 3e-29 RAFL MAP o
At3g02940 putative MYB family transcription factor 125 5e-29 RAFL MAP o
At1g08810 transcription factor like protein 124 1e-28 RAFL Mutants MAP o
At3g12720 myb like transcription factor 124 1e-28 RAFL Mutants MAP o
At2g38090 MYB family transcription factor like protein 123 2e-28 RAFL Mutants MAP o
At5g14750 myb transcription factor werewolf (WER)/ MYB66 123 3e-28 Mutants MAP o
At3g13540 myb-related protein 5 121 1e-27 RAFL MAP o
At4g26930 putative myb-related protein 120 2e-27 MAP o
At5g07210 putative protein 118 7e-27 Mutants MAP o
At5g61620 transcriptional activator - like protein 118 8e-27 Mutants MAP o
At5g40430 putative transcription factor (MYB22) 118 9e-27 Mutants MAP o
At3g01140 putative Myb-related transcription factor 117 2e-26 Mutants MAP o
At1g01520 hypothetical protein 116 3e-26 MAP o
At2g25230 putative MYB family transcription factor 116 5e-26 MAP o
At5g52260 unknown protein 115 7e-26 Mutants MAP o
At2g27070 putative two-component response regulator protein 114 2e-25 MAP o
At4g17780 MYB transcription factor like protein 114 2e-25 MAP o
At3g09230 unknown protein 111 9e-25 MAP o
At3g30210 myb-like transcription factor, putative 110 3e-24 MAP o
At3g28470 putative transcription factor (MYB35) 110 3e-24 MAP o
At1g57557 unknown protein 109 6e-24 Mutants MAP o
At5g16560 KANADI protein (KAN) 109 6e-24 MAP o
At5g52660 unknown protein 108 8e-24 RAFL MAP o
At4g01680 putative transcription factor 108 9e-24 RAFL Mutants MAP o
At4g28110 putative transcription factor (MYB41) 108 1e-23 MAP o
At5g23000 myb like transcription factor (MYB37) 108 1e-23 RAFL Mutants MAP o
At5g61420 putative transcription factor MYB28 108 1e-23 MAP o
At5g49620 myb-related transcription factor 107 1e-23 MAP o
At4g38620 putative transcription factor (MYB4) 107 2e-23 RAFL Mutants MAP o
At4g12350 putative transcription factor (MYB42) 107 2e-23 MAP o
At3g46130 Myb DNA binding protein -like 106 3e-23 RAFL Mutants MAP o
At4g09460 DNA-binding protein 106 3e-23 RAFL Mutants MAP o
At4g34990 MYB-like protein 105 5e-23 MAP o
At5g47390 Myb-related transcription activator-like 105 8e-23 RAFL MAP o
At4g09450 putative protein 105 9e-23 Mutants MAP o
At1g22640 putative transcription factor (MYB3) 104 2e-22 RAFL Mutants MAP o
At4g22680 myb-like protein 103 3e-22 RAFL MAP o
At5g14340 MYB40 - putative transcription factor 103 4e-22 MAP o
At3g27810 ATMYB3 (Atmyb3) 103 4e-22 RAFL Mutants MAP o
At1g35515 putative transcription factor (MYB8) 102 7e-22 RAFL MAP o
At5g07700 transcription factor (gb|AAD53097.1) 101 8e-22 RAFL MAP o
At2g16720 DNA-binding protein 101 8e-22 RAFL Mutants MAP o
At5g16600 transcription factor (gb|AAD53095.1) 101 9e-22 RAFL Mutants MAP o
At1g06180 MYB-related protein 101 1e-21 Mutants MAP o
At5g12870 putative transcription factor (MYB46) 101 1e-21 RAFL Mutants MAP o
At3g47600 putative transcription factor (MYB94) 101 1e-21 RAFL MAP o
At5g40330 myb-related protein 101 1e-21 Mutants MAP o
At3g10580 hypothetical protein 101 2e-21 MAP o
At1g18570 unknown protein 100 2e-21 RAFL Mutants MAP o
At4g05100 MYB - like protein 100 2e-21 RAFL Mutants MAP o
At5g40350 putative transcription factor MYB24 100 2e-21 MAP o
At1g74430 transcription like factor (MYB95) 100 3e-21 RAFL MAP o
At2g31180 putative transcription factor (MYB14) 100 3e-21 MAP o
At3g27920 MYB family transcription factor (GL1) 100 4e-21 MAP o
At5g15310 myb-related protein - like 100 5e-21 RAFL Mutants MAP o
At5g08520 putative protein 100 5e-21 RAFL MAP o
At5g01200 putative protein 99 6e-21 Mutants MAP o
At1g66230 myb-related transcription factor, putative 99 8e-21 Mutants MAP o
At5g62320 MYB99 99 8e-21 RAFL MAP o
At5g07690 transcription factor-like protein 99 8e-21 RAFL MAP o
At1g56160 putative transcription factor (MYB72) 98 1e-20 Mutants MAP o
At3g09600 putative MYB-related protein 98 1e-20 Mutants MAP o
At5g59780 MYB27 protein - like 98 1e-20 RAFL Mutants MAP o
At1g18330 hypothetical protein 98 2e-20 RAFL Mutants MAP o
At1g74080 putative transcription factor 97 2e-20 Mutants MAP o
At3g61250 putative transcription factor (MYB17) 97 2e-20 MAP o
At1g26780 putative transcription factor MYB117 (MYB117) 97 4e-20 Mutants MAP o
At3g53200 putative transcription factor (MYB27) 97 4e-20 RAFL MAP o
At1g18710 Putative MYB47 transcription factor 96 5e-20 RAFL Mutants MAP o
At5g17300 unknown protein 96 5e-20 RAFL MAP o
At5g02840 unknown protein 96 6e-20 RAFL Mutants MAP Alternative splicing o
At2g47460 putative MYB family transcription factor 96 6e-20 RAFL MAP o
At5g35550 Myb-related transcription factor LBM2-like protein 95 8e-20 MAP o
At5g52600 MYB82 (gb|AAF14064.1) 95 1e-19 MAP o
At5g58900 I-box binding factor - like protein 95 1e-19 RAFL MAP o
At3g11440 transcription factor like protein (MYB65) 95 1e-19 RAFL Mutants MAP o
At5g06100 transcription factor MYB33 - like protein 95 1e-19 RAFL MAP o
At5g56110 Atmyb103 (gb|AAD40692.1) 95 1e-19 Mutants MAP o
At5g60890 Myb transcription factor homolog (ATR1) 95 2e-19 RAFL Mutants MAP o
At1g69560 myb-related transcription factor, putative 95 2e-19 Mutants MAP o
At5g57620 Myb-related transcription factor-like protein 94 2e-19 RAFL Mutants MAP o
At1g74650 putative MYB family transcription factor 94 2e-19 MAP o
At3g28910 MYB family transcription factor (hsr1), putative 94 2e-19 RAFL MAP o
At3g12820 putative transcription factor (MYB10) 94 3e-19 RAFL MAP o
At5g62470 MYB96 transcription factor-like protein 93 3e-19 RAFL Mutants MAP o
At2g32460 putative MYB family transcription factor 93 3e-19 RAFL Mutants MAP Alternative splicing o
At3g11280 unknown protein 93 3e-19 RAFL Mutants MAP o
At3g08500 putative protein 93 4e-19 RAFL MAP o
At4g13480 myb-like protein 93 4e-19 Mutants MAP o
At1g16490 transcription factor (MYB58) like protein 93 5e-19 Mutants MAP o
At1g25340 putative transcription factor MYB116 (MYB116) 92 7e-19 Mutants MAP o
At1g17950 unknown protein 92 8e-19 Mutants MAP o
At3g24310 putative transcription factor (MYB71) 92 1e-18 Mutants MAP o
At2g26950 putative MYB family transcription factor 92 1e-18 Mutants MAP o
At3g01530 transcription factor like protein 92 1e-18 RAFL MAP o
At1g74840 MYB family transcription factor like protein 91 1e-18 RAFL Mutants MAP Alternative splicing o
At2g26960 putative transcription factor (MYB81) 91 2e-18 MAP o
At5g49330 putative protein 91 2e-18 MAP o
At5g55020 putative transcription factor MYB120 (MYB120) 91 2e-18 MAP o
At1g66370 Myb-related transcription factor, putative 91 2e-18 Mutants MAP o
At5g17800 MYB56 R2R3-MYB factor family member 90 3e-18 RAFL Mutants MAP o
At3g55730 MYB transcription factor - like protein 90 3e-18 RAFL Mutants MAP o
At3g16857 ARR1 protein, putative, 5' partial 90 3e-18 RAFL MAP Alternative splicing o
At1g18960 hypothetical protein 90 3e-18 MAP o
At1g49010 hypothetical protein 90 4e-18 Mutants MAP o
At4g33450 putative transcription factor (MYB69) 90 4e-18 MAP o
At1g71030 transcription factor like protein 89 6e-18 RAFL MAP o
At5g05790 putative protein 89 6e-18 MAP o
At5g04760 I-box binding factor-like protein 89 7e-18 RAFL MAP o
At3g62610 putative transcription factor (MYB11) 89 8e-18 Mutants MAP o
At4g18770 myb - like protein 88 1e-17 MAP o
At2g47190 MYB transcription factor (Atmyb2) 88 1e-17 RAFL Mutants MAP o
At3g27780 putative transcription factor MYB118 (MYB118) 88 1e-17 MAP o
At3g49690 AtMYB84 87 2e-17 MAP o
At3g09370 MYB family like transcription factor 87 4e-17 RAFL Mutants MAP o
At5g37260 putative protein 87 4e-17 RAFL MAP o
At4g37260 myb-related protein 86 6e-17 RAFL Mutants MAP o
At5g40360 putative transcription factor MYB115 86 6e-17 MAP o
At1g67710 response regulator 11 (ARR11) 86 6e-17 RAFL Mutants MAP o
At5g02320 myb -like protein 86 6e-17 MAP o
At5g65790 transcription factor-like protein 86 7e-17 RAFL Mutants MAP o
At3g04450 transfactor like protein 85 8e-17 RAFL MAP o
At5g67300 myb-related protein, 33.3K (pir||S71284) 85 8e-17 RAFL Mutants MAP o
At1g48000 putative transcription factor MYB112 85 8e-17 RAFL MAP o
At4g32730 putative myb-protein 85 1e-16 Mutants MAP o
At3g50060 R2R3-MYB transcription factor 85 1e-16 RAFL MAP o
At3g16350 putative MYB family transcription factor 85 1e-16 RAFL MAP o
At2g23290 putative MYB family transcription factor 85 1e-16 RAFL Mutants MAP o
At2g39880 putative MYB family transcription factor 85 1e-16 Mutants MAP o
At5g29000 unknown protein 84 2e-16 RAFL MAP o
At1g70000 hypothetical protein 83 3e-16 RAFL MAP o
At3g29020 putative transcription factor (MYB110) 83 4e-16 MAP o
At5g18240 transcription factor like protein 83 4e-16 RAFL MAP o
At5g11510 putative c-myb-like transcription factor MYB3R-4 (MYB3R4) 83 4e-16 MAP o
At5g59570 ARR1 protein - like 82 9e-16 RAFL MAP o
At4g37780 myb transcription factor like protein 82 9e-16 Mutants MAP o
At2g36890 putative transcription factor (MYB38) 82 1e-15 Mutants MAP o
At2g03500 unknown protein 82 1e-15 RAFL Mutants MAP o
At5g05090 unknown protein 81 2e-15 RAFL MAP o
At5g39700 myb like transcription factor (MYB89) 81 2e-15 MAP o
At3g04030 transfactor like protein 81 2e-15 RAFL MAP o
At1g25550 unknown protein 80 3e-15 RAFL Mutants MAP o
At1g73410 putative protein 80 3e-15 RAFL MAP o
At4g00540 putative c-myb-like transcription factor (MYB3R2) 80 3e-15 Mutants MAP o
At3g12730 regulatory protein of P-starvation acclimation respons... 80 3e-15 RAFL Mutants MAP o
At1g66380 Myb-related transcription factor, putative 80 4e-15 Mutants MAP o
At2g40970 unknown protein 80 4e-15 RAFL MAP o
At3g46640 putative protein 80 4e-15 RAFL MAP Alternative splicing o
At3g10590 hypothetical protein 80 5e-15 MAP o
At1g14350 putative transcription factor MYB124 (MYB124) 80 5e-15 RAFL Mutants MAP o
At1g49560 unknown protein 79 6e-15 RAFL Mutants MAP o
At2g01060 transfactor-like protein 79 6e-15 RAFL Mutants MAP o
At5g56840 putative protein 79 9e-15 Mutants MAP o
At4g37180 putative cytoskeletal protein 79 9e-15 RAFL MAP Alternative splicing o
At1g68670 unknown protein 78 1e-14 RAFL Mutants MAP o
At3g10760 unknown protein 78 1e-14 Mutants MAP o
At4g28610 unknown protein 78 1e-14 RAFL MAP o
At5g58080 ARR2 - like protein 78 2e-14 MAP o
At1g79430 unknown protein 77 2e-14 RAFL MAP Alternative splicing o
At2g01760 putative two-component response regulator protein 77 2e-14 RAFL MAP o
At3g62670 putative protein 77 3e-14 MAP o
At2g37630 putative MYB family transcription factor 77 3e-14 RAFL MAP o
At3g06490 myb-related protein, putative 77 4e-14 Mutants MAP o
At2g02825 MYB family transcription factor (MYB88) 76 7e-14 RAFL Mutants MAP o
At2g20570 GPRI1 protein (gpri1) 75 1e-13 RAFL Mutants MAP o
At1g13300 unknown protein 75 1e-13 RAFL Mutants MAP o
At1g56650 transcription factor, putative 75 2e-13 RAFL Mutants MAP o
At2g40260 hypothetical protein 75 2e-13 Mutants MAP o
At3g13040 unknown protein 75 2e-13 RAFL MAP o
At2g25180 putative two-component response regulator protein 74 2e-13 MAP o
At5g06800 putative protein 73 4e-13 RAFL Mutants MAP o
At5g45580 putative protein 73 4e-13 Mutants MAP o
At3g60460 myb protein - like 73 4e-13 Mutants MAP o
At2g06020 hypothetical protein 73 4e-13 MAP o
At1g66390 Myb-related transcription factor, putative 73 5e-13 Mutants MAP o
At2g38300 unknown protein 73 6e-13 RAFL Mutants MAP o
At4g18020 pseudo-response regulator 2 (APRR2) 73 6e-13 RAFL Mutants MAP o
At3g10585 putative protein 72 7e-13 MAP o
At1g49190 putative two-component response regulator gb|AAD12696.1 72 9e-13 Mutants MAP o
At2g02060 unknown protein 71 2e-12 Mutants MAP o
At3g24120 transfactor like protein 71 2e-12 RAFL MAP o
At1g69580 transfactor, putative 71 2e-12 Mutants MAP o
At5g44190 unknown protein 71 2e-12 RAFL MAP o
At4g13640 unknown protein 70 3e-12 RAFL MAP Alternative splicing o
At4g31920 predicted protein 69 6e-12 RAFL MAP o
At2g13960 putative MYB family transcription factor 68 1e-11 Mutants MAP o
At2g20400 unknown protein 67 3e-11 RAFL Mutants MAP o
At1g14600 hypothetical protein 67 3e-11 Mutants MAP o
At3g18100 putative transcription factor (MYB4R1) 67 3e-11 RAFL MAP o
At4g04580 putative protein 67 3e-11 MAP o
At4g16110 hypothetical protein 65 9e-11 RAFL MAP o
At4g39160 putative protein 65 1e-10 MAP o
At2g46410 putative MYB family transcription factor 64 2e-10 Mutants MAP o
At5g53200 putative protein 63 4e-10 MAP o
At3g25790 unknown protein 62 1e-09 MAP o
At2g30420 putative MYB family transcription factor 62 1e-09 MAP o
At1g32240 unknown protein 61 1e-09 Mutants MAP o
At5g42630 unknown protein 61 2e-09 MAP o
At5g49240 putative protein 60 4e-09 MAP o
At4g17695 GARP-like putative transcription factor KANADI3 (KAN3) 58 1e-08 MAP o
At3g52250 putative protein 56 5e-08 RAFL MAP o
At4g01060 myb-like protein 55 9e-08 RAFL Mutants MAP o
At2g36960 unknown protein 53 6e-07 RAFL MAP o
At1g58220 hypothetical protein 53 7e-07 RAFL MAP o
At3g21440 hypothetical protein 51 1e-06 MAP o
At1g01380 Myb homolog (CPC), putative 50 4e-06 Mutants MAP o
At1g09770 putative DNA-binding protein, Myb 44 3e-04 RAFL MAP Alternative splicing o
-sequences file phase 1
-sequences file phase 2
-alignment file phase 1
-alignment file phase 2
-alignment file PDF phase 1
-alignment file PDF phase 2
-tree file phase 1
-tree file phase 2

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