Phase1: All genes detected as TF_17_2 (119 genes).

Super Family:ARF
Sub Family:NPH4/ARF7
Query sequence of this family
Link to serched gene: At3g25183

Gene codeGene name ScoreE-value RAFLTransposon Mutants Microarray Genome map Alternative splicing
At5g20730 auxin response factor 7 (ARF7) 714 0.0 RAFL MAP
At1g19220 auxin response factor (ARF) like protein 654 0.0 Mutants MAP
At1g35240 hypothetical protein 615 e-176 MAP
At1g34390 auxin response factor, putative 612 e-175 MAP
At1g34410 auxin response factor, putative 611 e-175 Mutants MAP
At1g35520 auxin response factor, putative 603 e-172 MAP
At1g34310 hypothetical protein 598 e-171 MAP
At1g30330 putative protein 596 e-170 Mutants MAP
At5g37020 auxin response factor 8 (ARF8) 575 e-164 MAP
At1g19850 transcription factor monopteros (MP) 573 e-163 RAFL Mutants MAP
At3g61830 auxin response factor-like protein 554 e-158 RAFL Mutants MAP
At4g23980 auxin response factor 9 (ARF9) 549 e-156 RAFL MAP
At2g46530 putative ARF1 family auxin responsive transcription fa... 540 e-153 RAFL Mutants MAP
At1g59750 putative protein 513 e-145 RAFL Mutants MAP Alternative splicing
At1g77850 putative auxin response factor protein (T32E8.16) 484 e-136 RAFL MAP
At5g60450 auxin response factor 4 482 e-136 RAFL Mutants MAP
At4g30080 transcription factor like protein 450 e-126 RAFL MAP
At2g33860 auxin response transcription factor 3 (ETTIN/ARF3) 442 e-124 RAFL Mutants MAP
At1g34170 putative protein 439 e-123 MAP
At5g62000 auxin response factor - like protein 433 e-121 Mutants MAP Alternative splicing
At1g43950 hypothetical protein 303 3e-82 MAP
At2g28350 unknown protein 255 1e-67 RAFL MAP
At1g35540 auxin response factor, putative 245 8e-65 MAP
At4g14550 IAA14 233 5e-61 RAFL Mutants MAP Alternative splicing
At3g16500 phytochrome-associated protein 1 (PAP1) 229 8e-60 RAFL MAP
At3g23050 indoleacetic acid (IAA)-inducible gene (IAA7) 228 1e-59 RAFL MAP
At4g29080 phytochrome-associated protein PAP2 227 4e-59 RAFL MAP
At1g04240 putative auxin-induced protein AUX2-11 225 9e-59 RAFL Mutants MAP
At5g43700 IAA4 (MQD19.3) 220 3e-57 RAFL MAP
At3g04730 auxin-induced protein 220 3e-57 RAFL Mutants MAP
At3g15540 early auxin-induced protein, IAA19 218 2e-56 RAFL Mutants MAP
At1g04250 putative auxin-induced protein, IAA17/AXR3-1 208 2e-53 RAFL Mutants MAP
At2g22670 auxin-regulated protein (IAA8) 205 1e-52 RAFL Mutants MAP Alternative splicing
At5g65670 auxin-induced protein IAA9 (pir||T05902) 203 4e-52 RAFL Mutants MAP
At1g51950 IAA18 early auxin-induced protein 203 6e-52 RAFL Mutants MAP
At1g13260 putative protein 197 4e-50 RAFL Mutants MAP
At3g23030 auxin-inducible gene (IAA2) 194 3e-49 RAFL MAP
At1g52830 putative IAA6 protein 191 2e-48 MAP
At5g62010 ARF1-binding protein 188 1e-47 RAFL MAP Alternative splicing
At4g28640 early auxin-inducible protein 11 (IAA11) 188 2e-47 RAFL MAP
At1g04550 putative auxin-induced protein, IAA12 184 2e-46 RAFL Mutants MAP
At3g25730 AP2 domain transcription factor 183 5e-46 RAFL MAP
At2g33310 auxin regulated protein (IAA13) 183 7e-46 RAFL MAP Alternative splicing
At4g14560 auxin-responsive protein IAA1 181 2e-45 RAFL Mutants MAP
At1g15580 IAA5 176 9e-44 Mutants MAP
At1g25560 putative protein 175 1e-43 RAFL Mutants MAP
At1g68840 putative DNA-binding protein protein RAV2 175 2e-43 RAFL Mutants MAP
At5g25890 IAA28 168 1e-41 RAFL Mutants MAP
At1g05920 hypothetical protein 162 1e-39 MAP
At2g46870 RAV-like B3 domain DNA binding protein 160 4e-39 RAFL MAP
At1g80390 unknown protein 158 1e-38 Mutants MAP
At3g61970 RAV-like protein 158 2e-38 RAFL Mutants MAP
At3g17600 putative auxin-induced protein 152 1e-36 RAFL Mutants MAP
At1g01030 DNA-binding protein, putative 150 6e-36 Mutants MAP
At5g06250 putative protein 148 1e-35 MAP
At1g04100 putative IAA1 protein 146 5e-35 Mutants MAP
At2g36080 putative RAV2-like DNA binding protein 145 1e-34 Mutants MAP
At4g01500 putative DNA-binding protein 139 9e-33 MAP
At3g62100 auxin-induced protein homolog 136 6e-32 Mutants MAP
At2g07677 putative protein 130 4e-30 RAFL MAP
At2g46990 IAA20 128 2e-29 RAFL Mutants MAP
At3g24850 hypothetical protein 128 2e-29 Mutants MAP
At2g30470 putative VP1/ABI3 family regulatory protein 128 2e-29 RAFL MAP
At4g32275 unknown protein 126 9e-29 RAFL MAP
At5g24050 unknown protein 126 1e-28 Mutants MAP
At5g35780 unknown protein 125 1e-28 Mutants MAP
At4g32010 predicted protein 125 2e-28 RAFL Mutants MAP
At2g24670 hypothetical protein 125 2e-28 MAP
At1g15050 IAA34 124 3e-28 MAP
orf164 -mitochondrial genome- 124 4e-28 MAP
At4g03170 hypothetical protein 123 6e-28 MAP
At1g51120 hypothetical protein 123 9e-28 MAP
At5g38490 putative protein 120 5e-27 Mutants MAP
At1g50680 hypothetical protein 120 7e-27 MAP
At3g49610 putative protein 113 5e-25 Mutants MAP
At3g11580 putative DNA binding protein 112 1e-24 RAFL MAP
At3g24650 abscisic acid-insensitive protein 3 111 2e-24 RAFL Mutants MAP
At1g20600 hypothetical protein 111 3e-24 Mutants MAP
At5g38500 putative protein 110 5e-24 Mutants MAP
At1g32030 hypothetical protein 108 2e-23 MAP
At2g27410 hypothetical protein 108 2e-23 Mutants MAP
At2g31420 hypothetical protein 106 1e-22 MAP
At5g57420 putative protein 105 1e-22 MAP
At4g00260 104 2e-22 Mutants MAP
At1g05930 hypothetical protein, 3' partial 104 3e-22 Mutants MAP
At2g01200 putative auxin-induced protein 103 6e-22 RAFL Mutants MAP
At4g21550 VP1 like protein 103 8e-22 MAP
At2g33720 hypothetical protein 102 1e-21 MAP
At4g02870 hypothetical protein 100 6e-21 Mutants MAP
At2g31720 hypothetical protein 99 1e-20 MAP
At1g78640 Hypothetical protein 98 3e-20 MAP
At2g24690 unknown protein 98 3e-20 MAP
At2g21920 hypothetical protein 96 1e-19 MAP
At3g26790 FUSCA3 (FUS3) 95 2e-19 MAP
At3g25183 hypothetical protein 94 4e-19 MAP
At4g03160 hypothetical protein 93 8e-19 MAP
At2g24700 hypothetical protein 92 3e-18 Mutants MAP
At1g10455 putative protein 90 6e-18 MAP
At1g28300 VP1 protein, putative 90 8e-18 Mutants MAP
At2g31460 hypothetical protein 88 4e-17 Mutants MAP
At2g24650 hypothetical protein 87 6e-17 RAFL Mutants MAP
At1g26680 hypothetical protein 86 1e-16 RAFL MAP
At1g50220 hypothetical protein 84 4e-16 MAP
At4g05630 hypothetical protein 81 4e-15 MAP
At2g24680 unknown protein 80 1e-14 MAP
At1g51970 hypothetical protein 76 2e-13 Mutants MAP
At2g18810 hypothetical protein 70 8e-12 MAP
At4g31650 putative protein 65 3e-10 Mutants MAP
At4g31680 putative protein 55 3e-07 MAP
At4g31660 putative protein 53 7e-07 MAP
At4g31640 putative protein 52 2e-06 Mutants MAP
At4g31625 unknown protein 52 2e-06 RAFL Mutants MAP
At4g31690 putative protein 50 6e-06 Mutants MAP
At1g05615 putative protein 50 7e-06 Mutants MAP
At4g31615 putative protein 50 1e-05 MAP
At5g66980 putative protein 48 4e-05 Mutants MAP
At4g31610 reproductive meristem protein 1 (REM1) 47 5e-05 RAFL MAP
At4g31630 putative protein 45 2e-04 Mutants MAP
At5g60130 putative protein 45 3e-04 Mutants MAP
-sequences file phase 1
-sequences file phase 2
-alignment file phase 1
-alignment file phase 2
-alignment file PDF phase 1
-alignment file PDF phase 2
-tree file phase 1
-tree file phase 2