AGI ID: At5g62110

TF ID:TF_10_2
Super family:GARP
Sub family:ARR-B class
Gene name: putative protein

Amino Acid Sequence:


1
61
121
181
241
301
361
421
481
541
601
661
>At5g62110
MNVEGITRSQ IASHLQKYRK HMRRFKVNVT KADISKKAMK SNFESSSNIN PQCSYNYLGL
TKENLFKSQI GDTLGQSSLL LNNNDSIHSM YDGSIYGLNE PESNLSPMRE SVGFSRGVLP
LNEESECAFE TSQMSQVPRR GQYGTPSDIS GINSNLGTGY MCNSYAGISI DKNGHMLGLG
GAIVDSNGNG HLGESLGAMN WNLNNNDVRN YESSTSRFSS PFSSFLHNKV QPHHNLISQT
DGLLSTSILD TSQVPSFGQY GIPNDVVGME PEFGTSYMHS NYNGINTDQV GNLVGLGRER
VNVNGNVSLG QNLGSMNWNF DENNMSNHGS STSRFSSPFS SFEDQSLSHL NEETNELVPG
LENLSLYNDH QSINPFLGNT INSHFVENQD QGLVNNENLE FANDDQLERN EILTTYSVED
INNLSINNVK LNSNGETLNS TAANLEMLFP TLDMNIVNQH QGQVLSGGNL EFANDNQLER
NAILAGYSIE DINNLSINNH QGQVLSGVNF EFANDNQFER NAILAGYSIE DINNLSINNV
NDNSNEETLN SIAANNEMNF TILDVNTINQ VNGNSNEETL NSIVANSEIN FTTLDVNTIN
QVDNNFNEET LNSIAANSEM NFTTLDVNII NEEEQGAVDM MDIVITFDEE EEDVAALTDI
PEQDVEILTD VPEQGVTDLT DVPLTFDQVI F
Length = 691 AA.

PSI BLAST Result:

Query: Query sequence of TF_10_2
Sbjct: At5g62110

>At5g62110 putative protein
          Length = 691

 Score = 48.1 bits (114), Expect = 8e-07
 Identities = 16/24 (66%), Positives = 20/24 (82%)

Query: 35 MNVPGLTRENVASHLQKYRIYLRR 58
          MNV G+TR  +ASHLQKYR ++RR
Sbjct: 1  MNVEGITRSQIASHLQKYRKHMRR 24


InterPro Results:

IPR009057 Domain
SSF46689 T[1-26] 2.2e-05 Homeodomain-like
Homeodomain-like
NULL
seg ?[213-225]?[330-342]?[531-550] seg
NULL

Selected Motif:

Link to RARGE contents:

Genome Map

Gene information on other websites:

TIGR
TAIR
MIPS

Belonging families:

TF IDSuper familySub familyScoreE value
TF_10_2 GARPARR-B class 48 8e-07
TF_10_1 GARPG2-like 48 2e-05

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