K40402

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) increased width (PATO:0000600) (Rosette leaf::Shape::wide) desaturated green (PATO:0001272) (Rosette leaf::Color::pale)
	sporophyte vegetative stage (PO:0007134)	decreased speed (PATO:0000304) (Adult plant::Growth::slow)
	root (PO:0009005)	present in greater numbers in organism (PATO:0000470) (Root::Number::many)
T2
T2	rosette leaf (PO:0000014)	desaturated green (PATO:0001272) (Rosette leaf::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K40402

Determination of introduced cDNA(s)

J023140I22 - Rice Full-length cDNAs - Original: J023140I22

full reading [+] show sequence

GTCCTGCGCC TCACCTTGTC TAGTTAGCAA TGGCGGCTGA TCACCTTGTC 
GTGGCCATGC TTCTCCTGCT GGCTTTGTCG CCGCCGGCCG TTGCTGACGA 
CACGGCGGTG CTCGGCCGGA AAGGCGGCGT CGTGGAAGGG CAGGCGGCGG 
GGCCGGGGAG GTACGCCGTG ATATTGGACG CCGGCAGCAC CGGCACACGG 
GTGCACGTCT TCAGGTTCGA CAACAAGCTG GACCTCCTCA AGGTCGGCGA 
CAACATCGAG CTCTTCGCTA AGGTGGATCC TGGGCTGAGC TCCTACGCTG 
GACGTCCTCA GGATGCCGCA AACTCCATAT TGCCTCTGCT TGACAAGGCC 
AACACCGTTG TTCCTGCCAG ACTTATGAAC AAAACTCCCC TTAAACTTGG 
GGCAACTGCC GGACTCAGAC TTATTGGAGA TGAAAAGGCG AACCAGATTC 
TTGAAGCGGT TAGGGATGTA GTCCACACCA AGAGCAAATA TCAGTATAAC 
CCGAACTGGA TCAACGTTCT TGAGGGATCC CAGGAAGGGT CATACATATG 
GGTTGCTCTG AATTATCTCC TGGATAAATT GGGAGGAGAC TACTCTAAAA 
CCGTAGGGGT GGTTGATCTT GGAGGTGGAT CCGTACAAAT GGCATACGCC 
ATCTCATCAA ACACCGCTGC TACCGCTCCA AAGGTGCCCG AAGGAAAAGA 
TTCCTATGTT GTGAAGGAGT ATCTCAAGGG AAAAGATTAT AACATTTATG 
TGCACAGCTA TTTGCACTAT GGCGGTTTTG CTTCTCGCGC GCACATCCTA 
GAGAGAAAGG ATGGACCATT TAGCAACTGC ATGCTGCGCG GATTCAGTGG 
TAACTTCACC TACAACGGCA AGCAGTACGA CGCAACGGCC GCACCACAAG 
GTGCAGACTA CCACAAGTGC AGAGAAGAAG TAGTGAAGTT ACTGAAGGTG 
AATGCGCCCT GCGAAACCAA GAACTGCAGC TTCAATGGCG TCTGGAACGG 
TGGTGGCGGA GCAGGGCAGG ATGACCTCTA CGTTGCGTCC GCCTTCTACT 
ACATAGCCTC CCATGTTGGG TTCATCAACA GCGATGCACC CAGTGCGAAG 
TCAACCCCTG CAACGTTTAA GGCTGTTGCA GAAAAGGTTT GTAAACTGAG 
TGTCAAAGAA GCAAAAGTAG AATACCCCAA CGTTCGTGAT CATGCCTACT 
TATGCATGGA TCTTATCTAC GAATACTCCT TGCTCGTTGA CGGCTTCGGT 
CTACATCCAA GTAAGGAGAT AACGCTGGTA GACAAGGTGA AGCATGGGGA 
GTACTACATT GACGCGGCTT GGCCATTGGG TACAGCTATT GAAGCTGTGT 
CACCCAAAAA ACGGCTTCGA GAAATATACA AATGATCTTG AGATCGATGT 
ACTAGCTACT TTGGAAGTTA GGATATCGAT TGTTGTATGA TCGATGTCTG 
TGTGCTGGTT ATTACAGTAT AACTGAGTAT CATGATATAT AAGTAGTATG 
TTAATAATGG GTCGAGCTAT CAATAGATCG AGGCGGCCAT GCTCTTTGTC 
CTAGACTCCA AGTTGTGTAT GTTTGAATAT ATAGCAGCTT TCTATATATA 
ATTACGTACT ATCACAGAAA TCATCGGTTG TGTTTGTGTG TCATGAGCAC 
GCATGTCTTG TATGTAAAAG ACTGAACATC TGGTGCACAT TTGAGTATTT 
GACCTG

Gene models with high sequence identity

AT3G04080.1 [+] show detail - apyrase 1
E-value: 4e-116; Score: 415.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	Nucleoside phosphatase GDA1/CD39	0
HMMPfam	Nucleoside phosphatase GDA1/CD39	2e-108
HMMPanther	ADENOSINE DIPHOSPHATASE	2.6e-171
HMMPanther	Nucleoside phosphatase GDA1/CD39	2.6e-171

See the detailed result >

AT3G04080.1

Model type: Protein coding
Short Description: apyrase 1
Curator Summary: Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination.
Computational Description: apyrase 1 (APY1); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 2 (TAIR:AT5G18280.1); Has 1435 Blast hits to 1431 proteins in 229 species: Archae - 0; Bacteria - 35; Metazoa - 605; Fungi - 313; Plants - 348; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR