K38234

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38234

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38234

Determination of introduced cDNA(s)

J013124N22 - Rice Full-length cDNAs - Original: J013124N22

full reading [+] show sequence

GACCCGCCAA ACACACTTGC CAGTCTACTC TCGCCGGCGT CTTCCTCTCC 
TCGCCTCGTC TCGTTCGTGG CCAAACGAAG CTCGCGCCTC CCGGCCACTC 
GCAGTCGAAG CCCAGCAACC GCCGCCGCGC CGAGGCCGAG CAACAGTGAG 
GAGGTAGCTT GCCTGCAATG ATGGCCGGGA CCCTGCAGGT CGCCGGTGGC 
TGCCTGGCGC CCCTCCTCCC CAGCCGACGA GCGGCGGCGG CGGTACGCCC 
GCCACGCGCG TCCGGGGCGT CGGCGTCGGC GGCGGCGGCG GCGGCGGCGG 
TGGAGGAGGA CGGCAAGGTG AGGCTGGGTG GGTCGGACGT GGCGGTGACC 
AAGCTCGGCA TCGGCGCCTG GTCCTGGGGC GACACCACCT ACTGGAACGA 
GTTCCAGTGG GACGATAGGA AATTGAAGGC TGCTAAAGGA GCATTTGATG 
CGAGTGTCGA TTGCGGAATA ACCTTCTTTG ATACTGCAGA AGTATATGGT 
GCAGGGATAT CAGGAGCCAT AAATTCAGAA AGTTTACTAG GAAGATTCAT 
CAAGGAAAGG CAACAGAAAG AACAGGTCGA AGTAGCCATT GCGACAAAGT 
TTGCAGCCCT TCCGTGGAGG CTTGGCCGAG GAAGTGTTAT TTCTGCACTG 
AAGGACTCGT TATCCCGCCT TGGCGTCTCC TCAGTTGAGC TCTACCAACT 
TCATTGGCCA GGGATATGGG GAAATGAAGG TTACCTTGAT GGTCTTGGAG 
ATGCTTATGA GCAAGGTCTT GTAAAAGCTG TTGGAGTCTC AAACTACAGC 
GAAAAGCGTC TACGGGATGC TTACGAGCGC CTCAAGAAGA GGGGAGTTCC 
ACTTGCTTCA AACCAAGTAA ACTACAGTTT GATATACAGG AACCCTGAAG 
AAAATGGGGT AAAAGCGGCT TGTGATGAGC TTGGTATTAC TTTGATCGCA 
TATTCCCCGA TCGCTCAAGG TGTTCTGACA GGAAAATACA CTCCAAATAA 
TCCCCCAACT GGGCCCCGTG GACGAATATA CACTCCTGAG TTCCTGACCA 
AGCTCCAACC ACTTATTAAC AGGATTAAAG AGATTGGAGG AAGTTATGAG 
AAGACCCCAA CTCAGGTGGT TCTGAACTGG CTGATCTGCC AAGGCAACGT 
TGTGCCGATC CCCGGAGCGA AGAACGCAGA GCAGGCCAGG GAGTTCGCTG 
GTGCGCTCGG GTGGAGCCTG ACGGATCAGG AGGTGGAAGA ACTGCGTTCC 
ATGGCACGAG AGATCAAGCC GGTCATCGGA TTCCCAGTAG AGAAGTTGTA 
ATTTCTAGTG AGTTTTTCTT CTACTTTGGG TCTCCGAGAA CATCATTTAC 
ATAAATACAC AATGATCTAG ACATACATAG ATAGGAACCA TGTGTAGTCT 
TTGGAACTGA AAATTAAGAT GTCTTAGAAA ATAACCAAAA TTTACAGTCT 
GAGTAGCGTA CATGCATGTA TGCTCATCGA CCATATTACA ACTAAGATTG 
GTAACTGGAT TATCTTCAAG AAACCAATGT TTTATTTTCT CCG

Gene models with high sequence identity

AT1G06690.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
E-value: 2e-159; Score: 559.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Aldo/keto reductase	1.3e-64
Gene3D	Aldo/keto reductase	5.5e-71
HMMPanther	ALDO/KETO REDUCTASE	8.2e-110
HMMPanther	Aldo/keto reductase	8.2e-110
superfamily	Aldo/keto reductase	1.5e-78
PatternScan	Aldo/keto reductase, conserved site	0

See the detailed result >

AT1G06690.1

Model type: Protein coding
Short Description: NAD(P)-linked oxidoreductase superfamily protein
Computational Description: NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink).
Link: InterPro Scan - TAIR