K33540

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33540

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33540

Determination of introduced cDNA(s)

J023030H18 - Rice Full-length cDNAs - Original: J023030H18

full reading [+] show sequence

GATCCCGCGA GGGGTTTAAG AGCGAAGCCC TCGCCGCCAC CCCGCCTAGG 
GTTTTTCCGG ATCTCGCCGC CGCCTCCTCC TCCTCCTCTC CACCTCCGCC 
GCCACCACCG CCGCCGCCAT GGCCATCGGA TCTCTCATCG CGTCGAGGCT 
GGCCAGGTCC ACCGGCCACG CCCTCGCCTC CGCCGCCTCT CAGGCTCCGA 
TGGCCCGTCA CGCGGCGGCG TCTCCTCTGT TGTCCAGGCT TGGATCAGTG 
GCTCGTGCGT TCAGCTCAAA GCCTGCCGCC GCGGATGTTA TTGGGATCGA 
TTTGGGAACG ACCAACTCGT GTGTCTCCGT TATGGAAGGG AAGACACCAC 
GAGTGATTGA GAATGCGGAA GGCGCAAGGA CGACACCCTC CATTGTTGCC 
AAGAACCAGA ATGGTGATCT TTTGTTGGCA TAACCGCGAG TCGGCAGGCA 
GTGACCAATG CCCAGAACAC GGTCCGTGGG TCTAAGCGCT TGATTGGTAG 
AACTTTTGAT GACCCACAGA CTCAGAAGGA AATGAAGATG GTGCCTTACA 
AGATTGTCAG GGGACCTAAT GGTGATGCTT GGGTGGAGAT GGGTGGGCAG 
CAGTACTCCC CAAGCCAGAT TGGTGCATTT GTTCTCACCA AGATGAAGGA 
AACTGCAGAG GCTTTCCTTG GCAAAACTGT CTCCAAGGCT GTTATCACTG 
TCCCAGCTTA TTTCAATGAT GCTCAGCGCC AGGCTACCAA GGATGCTGGT 
AGGATTGCCG GGCTAGAGGT GATGAGGATT ATCAATGAAC CCACTGCCGC 
AGCTCTGTCA TATGGGATGA ACAACAAGGA GGGTCTGATT GCTGTATTTG 
ACTTGGGTGG TGGCACATTT GATGTATCAA TCCTTGAGAT CTCCAATGGA 
GTTTTTGAGG TCAAGGCAAC CAATGGAGAT ACTTTCCTTG GTGGTGAGGA 
CTTTGATGGT GCATTGCTTG ACTACCTGGT TAGTGAGTTT AAGAAGTCTG 
ACAACATTGA TCTGAGCAAG GATAAGTTGG CCTTGCAAAG GCTCAGGGAA 
GCTGCAGAGA AGGCCAAGGT CGAGCTTTCC TCAACCATGC AGACTGAAAT 
CAACCTCCCC TTTATTACTG CTGATGCCAC TGGTGCAAAA CACTTCAATA 
TTACCTTGAC CAGATCAAAG TTCGAGTCTC TTGTGCAGTC TCTCATTGAG 
AGAACTCGCA TCCCCTGTGT GAACTGCCTG AAGGATGCAG GCGTATCTGC 
AAAAGACATT GATGAGGTTC TACTGGTTGG TGGTATGACG AGGGTGCCAA 
AGGTTCAGGA TATTGTTTCT CAGATATTCA ACAAGACACC AAGCAAGGGT 
GTCAATCCTG ATGAGGCTGT TGCCATGGGA GCTGCCATTC AGGGTGGCAT 
CTTGAGGGGT GATGTGAAGG AGCTCCTTTT GCTGGATGTC ACTCCCCTCT 
CCCTTGGTAT TGAGACTCTT GGAGGCATCT TCACAAGGCT AATTAATCGG 
AACACAACCA TTCCAACCAA GAAGAGTCAG GTCTTCTCCA CTGCTGCAGA 
CAACCAGACC CAGGTTGGAA TCAAGGTGCT CCAGGGTGAG AGAGAGATGG 
CCACAGACAA CAAGCTTCTT GGTGAGTTCC AGCTTGAAGG TATTCCACCA 
GCCCCAAGAG GTATGCCTCA GATTGAGGTC ACATTCGACA TCGATGCCAA 
TGGTATTGTC AAGGTGTCAG CCAGGGACAA GTCCACTGGC AAAGAGCAAG 
AAATCACTAT AAAGTCTTCA GGCGGTTTGT CTGAAAGTGA TATCGAGAAG 
ATGGTGAGGG AGGCTGAGCT ACATTCTCAG AAGGATCAGG AAAGGAAATC 
ATTGATTGAT CTGAAGAACT CTGCAGACAC CACGATCTAC AGCATTGAGA 
AGAGTGTCAG TGAGTACAAG GACAAGGTTC CTGCTGAAGT CACCAATGAG 
ATTCAGTCTG CTGTATCTGA TCTAAGAGCA GCAATGGCTG AGGATGATTT 
GGAGAAGATC AAGCAGAAGC TTGAGGCTGC AAACAAGGCA GTTTCAAAGA 
TTGGAGAGCA CATGCAACAA GGTGGCGGTG GCGGCAGTGG CGGCGGCAGC 
AGCAGCAGCA GTGGTGGTGA CCAGACTCCT GAGGCTGAAT ACCAGGATGC 
TGCTAAGGAA GCTAAGATGT AGATTTGATC TACATCTAGT TTCTACCTTT 
TTTTGTTCAT GTAATAGGAA GTTGACATCT TACCCACCCC TGGTTTCTTA 
GGTTTCTAAG AGGGTTGCTA TACCTGTAGC TTTTTTGGGC GGAGAATCGC 
TGATAAATTG TGAGCGGGAA CAAACTCATT GGTTAATTGA GCCATCCACG 
AAATATTTCA TT

Gene models with high sequence identity

AT5G09590.1 [+] show detail - mitochondrial HSO70 2
E-value: 0; Score: 99.40

InterPro Scan Digest

Program	Description	E-value
PatternScan	Heat shock protein 70, conserved site	0
PatternScan	Heat shock protein 70, conserved site	0
PatternScan	Heat shock protein 70, conserved site	0
Coil	coiled-coil	0
Coil	coiled-coil	0
FPrintScan	Heat shock protein Hsp70	2.3e-63
FPrintScan	Heat shock protein Hsp70	2.3e-63
FPrintScan	Heat shock protein Hsp70	2.3e-63
FPrintScan	Heat shock protein Hsp70	2.3e-63
FPrintScan	Heat shock protein Hsp70	2.3e-63
FPrintScan	Heat shock protein Hsp70	2.3e-63
FPrintScan	Heat shock protein Hsp70	2.3e-63
FPrintScan	Heat shock protein Hsp70	1.2e-08
FPrintScan	Heat shock protein Hsp70	1.2e-08
superfamily	Actin-like ATPase domain	1.6e-66
superfamily	Heat shock protein 70kD (HSP70), peptide-bind	6.3e-62
superfamily	Actin-like ATPase domain	1.4e-42
superfamily	Heat shock protein 70kD (HSP70), C-terminal s	1.2e-08
superfamily	Actin-like ATPase domain	2.8e-12
HMMTigr	Chaperone DnaK	0
HMMPanther	HEAT SHOCK PROTEIN 70 (HSP70)	1.3e-263
HMMPanther	Heat shock protein Hsp70	1.3e-263
HMMPanther	HEAT SHOCK PROTEIN 70 (HSP70)	6.2e-17
HMMPanther	Heat shock protein Hsp70	6.2e-17
HMMPfam	Heat shock protein 70	8.9e-243
HMMPfam	Heat shock protein 70	6.5e-16
HMMPfam	Glutamate dehydrogenase, NAD-specific	4.6e-23
HMMPfam	Glutamate dehydrogenase, NAD-specific	5e-18
HMMPfam	Glutamate dehydrogenase, NAD-specific	4.7e-18
HMMPfam	Glutamate dehydrogenase, NAD-specific	2.7e-29
HMMPfam	Glutamate dehydrogenase, NAD-specific	1.4e-09
Gene3D	no description	8.4e-06
Gene3D	no description	3.8e-28
Gene3D	no description	1.1e-76
Gene3D	no description	1.8e-08

See the detailed result >

AT5G09590.1

Model type: Protein coding
Short Description: mitochondrial HSO70 2
Curator Summary: heat shock protein 70 (Hsc70-5); nuclear
Computational Description: mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink).
Link: InterPro Scan - TAIR