K32944

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32944

Determination of introduced cDNA(s)

J013063A11 - Rice Full-length cDNAs - Original: J013063A11

full reading [+] show sequence

GGCCTCCCCC CACAGCGGAA GAAGATTCCA ACGAGAAGGC GAGCGAGAGA 
GAGGAGAAGA AACCAAGAGA GCGAGGGCGG AGGAAGCAGT CGAGCTCTCC 
CAGCCTCGGC GGCTAAACTC CCCCCCCCCC TCGCTTTCTT CCCCTCCTTC 
CTCAATCTCC AAGCCTCGAT ATCCGTGTTC TTCTCTGACC GAATCCGAAT 
CCCGCGTTTC TTTGTTGCGC GCGCGACCGC CCGCGGGAAT CTTGGTGGTT 
CTTGGGCGAT CGTGATGGCA TTGGATGGCG GCGGCGAGGT TGGCAGGAGG 
AGGAGGAGGA GGGGATGGGG AGGCGGGTTC CCGAGCCTGA TGCGGCGGAA 
GCAGGTGGAC TCCGACCGGG TCCGCGCCGC CGAGGGGGAA GGGCAACCCC 
AGCTCGCCAA GGAGCTTAAC ATCCCGGCGC TGGTCGCGAT CGGTGTCGGT 
TCAACAATTG GAGCTGGGGT ATATGTTCTT GTCGGAACAG TTGCTAGGGA 
GCATGCTGGT CCAGCATTGA CAATTTCATT TCTGATAGCT GGAATAGCTT 
CCGCGCTCTC AGCCTTCTGT TATGCCGAGC TTGCTAGTCG GTGCCCATCT 
GCTGGAAGCG CCTACCATTA TTCATACATC TGCGTTGGTG AAGGTGTTGC 
CTGGTTGATT GGTTGGGCTT TAGTGCTGGA ATATACTATT GGTGGATCTG 
CTGTTGCCCG TGGCATATCC CCCAATCTTG CCTTGTTCTT TGGAGGACCA 
GACAGTCTTC CATGGATTTT ATCACGCCAC CAGCTTCCAT GGTTTGATGT 
CATTGTTGAT CCCTGTGCCG CTGCCCTCGT TTTTGTTGTT ACTGTTTTGC 
TATGTGTTGG GATAAAAGAG AGTTCAGCTG TACAAGAGCT TATAACAGTT 
CTGAATGCTT GTGTGATGAT ATTTGTTATT GTAGCTGGTA GTTATATCGG 
CTTCCAGATA GGATGGGTTG GCTATAAAGT TACTGATGGA TATTTTCCAC 
ATGGGATAAA TGGAATGCTT GCTGGATCAG CAACTGTTTT CTTTGCATAT 
ATTGGCTTTG ATACAGTTGC TAGTACTGCT GAGGAGGTGA AGAATCCACA 
GAGAGATCTA CCACTGGGAA TAGGAGCGGC ATTGTCTATC TGCTGTTGCT 
TGTACATGAT GGTTTCTGTT GTTATTGTTG GGCTGGTACC ATATTTCGCT 
ATGGACCCAG ATACGCCCAT TTCATCTGTC TTTGCGAAAC ATGGAATGCA 
GTGGGCCATG TATATTGTGA CAAGTGGTGC TGTTCTTGCA CTTTGTTCAA 
CTTTGTTGGG GTCACTTCTT CCGCAGCCTA GAATACTAAT GGCGATGGCA 
CGAGACGGGC TGCTGCCATC TTTCTTCGCC GATGTTAACA AGAGGACACA 
AGTTCCTGTA AAGAGCACAG TCGTGACTGG TCTCTGTGCA GCAGCTCTGG 
CTTTTTTCAT GGATGTTTCC CAGCTGGCAG GAATGGTCAG TGTAGGTACA 
CTCCTTGCAT TCACCATAGT TGCTGTCTCG ATCTTAATAC TCAGATATAT 
TCCTCCGGAT GAGGTTCCTC TGCCTTCATC TCTGCAAGAA ACATTCTGTT 
TGAGCCAAGA ATATGATGAG GAAAGGGTTA GCGGTATTCT TGGAGATGAG 
AGATGCAAAA CATCTGAAAC AAAGGATGTG ATTCTCGCAG AATCTATGGA 
GGATCCTCTC ATTGAGAAGA AAATAACAAG AAAGATGGAC GAGATGAAGC 
GTCGGAAGGT GGCCGCTTTC AGCATAGGAT CTGTTTGTGT TGGAGTTATG 
GTTCTCACAT CCGCAGCTTC TGCCACATGG CTGCCTTTTC TTCCTATGTG 
TATTGGCTGC ATCGTTGGCG CTCTGTTGCT TGTAGCCGGT CTTGGCCTCC 
TCTGCTGGAT CGACCAAGAT GATGGCAGGC ATTCTTTCGG CCAATCTGGA 
GGATTTACAT GCCCTTTCGT TCCACTTCTG CCAGTCTTGT CTATCCTCGT 
AAACACATAC CTGTTGATAA ATCTGGGTGG AGAGGCATGG ATGAGAGTAG 
GCATATGGCT GCTGATAGGC GTCTTGGTGT ACATTTTGTA CGGACGAACT 
AACAGCTCCT TGAAGGATGT CATCTACGTC CCCGTAGCGC AGGCCGATGA 
GATATACAAG AGTTCATCTG GATATGTGTC CTAGAAAAAA ATATTTTTTA 
GTTTGCACTA TTCTTCAGTG ACAACATGCC TCACCTGTCT GCAATTGGAA 
GATTAGCCTG GACAGAGGAG ATGCTAAATC ATTCATACTT GGGGAAAAAA 
CATGGATGCA ATATTATATT TAGGATGTGC ATAGGTGTAT ATATAAACCC 
AATTGGACAG TGGAATACAT GATTTTGTGT ATATAAGCCC TTTGTACTAA 
ATGGTAAACT GAAAAGCGGT TATCGATGAA AAAAAAGTGC AATAGACGAA 
GTACT

Gene models with high sequence identity

AT1G58030.1 [+] show detail - cationic amino acid transporter 2
E-value: 0; Score: 743.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Amino acid permease domain	1.2e-39
HMMPanther	Cationic amino acid transporter	9.3e-238
HMMPanther	Amino acid/polyamine transporter I	9.3e-238

See the detailed result >

AT1G58030.1

Model type: Protein coding
Short Description: cationic amino acid transporter 2
Curator Summary: Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.
Computational Description: cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink).
Link: InterPro Scan - TAIR