K30025

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30025

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30025

Determination of introduced cDNA(s)

J013075K03 - Rice Full-length cDNAs - Original: J013075K03

full reading [+] show sequence

GGCGCACGGA GAAGTCCCGA GACCGGCGCC GCCAGGACCG CCACCCACCT 
CTGCCTCCGC CCTCCAAACC CTAGCTCCGG CGATGGCCCC GAAGCGCCCC 
ACTCCGCCGC CGCCGCCGCC TCCGGTTGCC TCCTCAGAGG AAACCGCCTC 
CGGCTCGGAC TCGGACGAGT CGGAGGAGGA GGAGGAGGAG AGTCCCCTTG 
CTCAGCCCGC ACCCGTGGTC TCTAACAAGG GCGCGGAGTC CGATTCTTCC 
GGGGAGGAGG AATCGGAGGA GGAGGAGGAG GAGGACTTGG TGCGCTCCTC 
CGCTACCAAG AGCAGGGATC CACCGCAGGA GAATCGCGAG GAGGATGATT 
CGTCCGATGA GGAAGAGGAC GAGTCGTCCG AATCCGAGAA GGCGGAGGCG 
CCGCCGCCGC CGCCGCCGAA TCCGGCTCCG AAGCAGGGGG CGGAGGGGAA 
TGGCCCGAAG GTCTCGTCGC CCAAGAGGCA GGCCTTCCAC CGCATCTGGT 
CGACCGAGGA CGAGGTGCGC ATCCTCGAGG CGCTCGCGGC GCACCGCCGG 
GAGCACGGGT CGCTGCCACA GACCGACGCG CTCATCGCCA CCCTCGCCGG 
CAGCCTCGAC AACACTGGCT ACGGCCGCAA GGAGCTCCAG GGGAAGGTCA 
GCACTCTCAA GCGCCGTTAC GAATCCACCG CTAAGAAGAA GGGCGATCTC 
CCAAGCAAGG GCCATGACCG CCGGCTCTAT GACCTCTCCA AGAGCGTCTG 
GGGCAGCGAG GCGGCAGCGG CGGCGGTGAA CGGCACCACC ACCGCGCCGA 
GGGAGTTCGG CGAGATGTGC GAGCTGTACC CGCACCTCGC TGAGGAGGTC 
AAGTTGCTGG AGGCGGCACA CCCTGGCTTG TTCAAGAGGG ACTTCGGGAA 
GCTCGATGAC GACAAGGCGC ATGCGCTGGA CATGAAGATC AAGAAGCAGA 
GGATTGCCGA GATTTCGGTG GTGCTGCGCC GTGGCGACCT GACCAAGGAG 
GTGACCAAGG TGCTCGCTGA GCTGGTCGAG TGACTAGGTG AGCTGAACTG 
AAGTGAACAG TAGTAGCTCG GCGTTCCTTA CCATGGCATA AGAAAGTGTA 
CCTGGTCATT ACCTGCAAAC TATATCGTGA ACAGGCATTA CCTGCAAAAT 
TTTGCTTCTT AGTGATGGAG TTGGATGTTC TATGTTCT

Gene models with high sequence identity

AT1G44810.1 [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
E-value: 1e-06; Score: 51.60

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF573	3.9e-13
Coil	coiled-coil	0

See the detailed result >

AT1G44810.1

Model type: Protein coding
Short Description: DNA-binding storekeeper protein-related transcriptional regulator
Computational Description: DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 1180 Blast hits to 828 proteins in 148 species: Archae - 2; Bacteria - 95; Metazoa - 299; Fungi - 217; Plants - 279; Viruses - 6; Other Eukaryotes - 282 (source: NCBI BLink).
Link: InterPro Scan - TAIR