K28116

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28116

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28116

Determination of introduced cDNA(s)

  • J013078K12 - Rice Full-length cDNAs - Original: J013078K12

    full reading [+] show sequence

    Nucleotide sequence: J013078K12 - full reading 
    GAGCCTGGCC TATCTTCCTC GTCCTCTTCC TCCTCCTCCT CCTGCCTAGC 
    CTATTTTGCT TTGGTCGATT GCTGCTGCTG TGGTGGTGGT GGACTGGTGG 
    TGGCGGCTAG CGAGATAATA AGAGTGACTG GATAGGATGG CGACGACGGT 
    GGCGGCGATG TGCGGGGCGG CGGAGGAGCG GGTGGTGGGG ACGCACAAGG 
    CGCCCGGGGC GTGCCCGCGG TGCGGCGGCG CGGTGGTGGC CACCGACGTC 
    GAGAGCGAGC GCCGCATCCT CTGCCTCCCG CTCTGCGTCA AGAGCAAGCG 
    CAAGTACTCC TGCTCCAGGT GCCTCCGCCG CCTCGTCACC CTCTACAGCT 
    AGACAAAACT TCTTGCTACT TTCATCACAG TGGTTAATTT CTTGATTAGG 
    TTCATTTGCC CTTGATTAAT TAAGGATAAT CCATCCTTCC TTCCTTCCTA 
    GCTCTCGTCT CGGCTAGCTA GTGTGTGCTC TTCTTGTCTA GCAGTACAAC 
    TAGTTGATAG GGACTAGCTA GCTGATCATC GGCAGATGGA TTAATGTTTC 
    GTCTGGTGCG ATCAACCGTG TGTCTAATCT TGCGATCAGC GGACAGCAGA 
    TGTGCCTACA TGTGCATCAC GTGACGCTGT GCGTGCCTGA CGCTTTTTGT 
    GTTGGTATGT TTGTAAAATT GTAAAAAATG TAAATCAGGT GTGTGTAACT 
    ATGTGTTCCC AGTGTCTTGT ATTTACTCCT CCAGTTAGTG AAAACTGAGT 
    GACTAACGTT CT

    Gene models with high sequence identity

    1. AT5G10695.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); ...
      E-value: 1e-11; Score: 67.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G10695.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR