K28029

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28029

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28029

Determination of introduced cDNA(s)

J013000F01 - Rice Full-length cDNAs - Original: J013000F01

full reading [+] show sequence

GCTTCCTCTC CTCTTCCTCC CAAGAATCCC CATAGCTCAA GCAAAGGGAG 
AGAGCAGCAG CAGCAAGAGG AGCACGCGGG GAGCTAGCTA GCTCCGCCGC 
CGCCGACGAG CTCCGGCGGC TCGCCGTTAT CCGCTCGCTG ATCGAGCCGT 
GTGCGGGTGA GAAAGAAAAA GAAAAAAAAA AGATCGCGCC TTTTTGGCGG 
CTTCTTGGGG TGTGAATCCA CGGTTTCCCC GGGGTAGGAT CTTGATGGGG 
CTCGAGGAAG GCGGCGCGAT GAGGGCGCTG ATGCGGCGGA AGCAGGTGGA 
CTCCGACCGG GTCCGCGCCG CCGGCGGCCA CCAGCTCGCC AAGGAGCTCT 
CCGTTACGCA GCTCGTCGCG ATTGGTGTTG GTTCAACAAT TGGAGCTGGA 
GTATATGTTC TTGTGGGAAC AGTTGCTCGG GAGCATGCTG GGCCGGCATT 
GACACTTTCA TTTCTGATAG CTGGAGTGGC AGCTGCACTC TCAGCTTTCT 
GTTATGCAGA GCTTGCTAGT CGCTGCCCTT CTGCAGGAAG TGCCTACCAT 
TATTCGTACA TCTGCGTTGG CGAAGGAGTT GCATGGCTGA TTGGTTGGGC 
ATTGATACTG GAATACACCA TCGGCGGATC AGCTGTTGCC CGTGGCATTT 
CTCCCAATCT GGCTTTATTT TTTGGAGGAC AGGATAGTCT ACCATGGTTT 
TTAGCACGCC ATGAGCTTCC ATGGTTTGAT GTTGTTGTCG ATCCTTGTGC 
GGCTTTCCTG GTTCTCGTTG TCACCGCCTT GCTATGCAAG GGGATAAAAG 
AGAGCTCATT TGTACAAGGA GTTGTGACAG TCCTAAATTG CTTCGTGATG 
CTATTTGTTA TTATAGCCGG CAGTTACATT GGCTTCCAAA CAGGATGGGT 
CGGCTATAAG GTGGCTGGCG GGTTTTTCCC TTATGGGGCG AACGGAATGC 
TTGCTGGGTC AGCAACTGTT TTCTTTGCCT ACATAGGCTT TGATTCAGTT 
GCTAGCACTG CCGAGGAGGT GAAAAATCCC CAACGAGATC TGCCACTGGG 
AATAGGAACA GCATTGTCAG TTTGCTGTTC CTTATACATG TTGGTTTCAG 
TTGTTATCGT TGGTCTGGTA CCATATTTCG CTATGGACCC AGATACCCCT 
ATATCATCAG CCTTTGCAAG ACATGGGATG CACTGGGCCA TGTACCTTGT 
TACAACTGGT GCTGTTCTTG CTCTTTGCTC AACCTTGATG GGATCGATTC 
TGCCACAGCC AAGAATATTG ATGGCCATGG CACGCGATGG GCTTTTGCCA 
TCCTTCTTCT CTGATGTCAA CCAGCGGACA CAAGTTCCTG TCAAGAGCAC 
AATTGTTACT GGCATATGTG CAGCTTGTCT GGCCTTCTTC ATGGATGTGT 
CACAACTGGC AGGAATGGTC AGTGTGGGCA CACTCCTTGC ATTCACTATA 
GTTGCTGTGT CCATCTTGAT CCTCAGATAT GCTCCTCCAG ATGAGGTACC 
CCTGCCATCT TCTCTGGAAG CGTCATTCCG TTTGAGCCAA GAATATGATG 
AGGAAAAGGT TAGGGGTCCT CCTGTAGATG CGAATCATGA ACAGTTGTCA 
TCTGTGGTAG AATCAATAAA TGACACCCTT ATCGAGAAGA AGCAAGACAC 
AAGTGTGGAG GAGTCAAAGC GTCGGAAAGC AGCTGTTTGC AGCATATCAT 
CTGTATGTGT AGGGGTTGTG GTCCTCACAA CTTCAGCTTC TTTCACATTC 
TTGCCATTCC TTTTGCGATG CTTCTTCTGT GTTTTTGGTG GCCTACTCCT 
CCTAGCCGGT CTCGGTGTCC TCTGCTATAT CGACCAAGAT GACGGGAGGC 
ACTCATTTGG TCACTCTGGA GGATTCATCT GCCCCTTCGT TCCGTTGTTG 
CCGGTGATGT GCATCCTCGT GAACACATAC TTGTTAGTAA ACTTGGGTGG 
AGGGACATGG ATGAGAGTTG GGGTATGGCT GGTAATGGGA GTATTCGTGT 
ACATTTTCTA TGGCCGGACC CACAGCTCAT TGACCGACGT GGTGTATGTT 
CCGGTGGCGC AAGCGGAAGA GATATACGGT TCATCATCTT CATCAGGATT 
TGTGGCCTAG GTAAGGAGCA GAGTACCAAA GCCTTGAGTG ATGAAATGCT 
CCAAAATCAA TTTTACCACA CTTTGAACAA ACCTGGCTGA AAGGGACTCC 
TGCTGCTGCG TTCTGTATTG CATGCCAGGC ATATGGGTTT GAAGAATTCA 
ATTCATATAT TGATTTTTAA ATTGTATAAA TTATAGTGTA AGGTCATATT 
TCGTATAAGC ACCTAGTTGA ATGAATGTGA ATATTAAATA GATATATAAT 
GAAGATAAGG TCTGTAATAT GTGTAAATTC ACTAGAGTAT ATCCCAGCTT 
CTGCTGGGAA AATTCATATT TCCATGTACC TTTTGCACTC GAGGTCTTCT 
TGAGTGGGAA ATGCTGAAGA CCTTGGTCAG ATCCTGCAAC ATGAATAAAG 
TCAACACATT CCCATT

Gene models with high sequence identity

AT1G58030.1 [+] show detail - cationic amino acid transporter 2
E-value: 0; Score: 776.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Amino acid permease domain	5.5e-37
HMMPanther	Cationic amino acid transporter	1.3e-247
HMMPanther	Amino acid/polyamine transporter I	1.3e-247

See the detailed result >

AT1G58030.1

Model type: Protein coding
Short Description: cationic amino acid transporter 2
Curator Summary: Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.
Computational Description: cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink).
Link: InterPro Scan - TAIR