K27124

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27124

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27124

Determination of introduced cDNA(s)

J013053H16 - Rice Full-length cDNAs - Original: J013053H16

full reading [+] show sequence

GAATATCAAA GATTGGGGCT CATCCCTTCC ATCACTTTGT AGTTATCAGC 
ATCTAGCAGA CTTTGGCTAT GTACTAAACT CATTTTTTTT GTGTAGTTTC 
CTCTATAATT GCAAGGAACA AACATGGTGG ATCTACTAGA GGTATATGTT 
CAGTGGTCAT AGTAGAGACT ATCCAACAAA TAGTATCTTT TATTCAGAAT 
CACAGGAGCA GAAGCATGTC AAGGAGGAGA CTCATCGTCT GCGGCAGCTT 
CTCGTCGAAA TTCACACCGC TCTGGAGGCA GCCAAGGGGT GTGCCATCAC 
CAATTCATGG CTACTACGCT GGCTACGCGA GCTTGAGGAC GCCGCATGTC 
GAGGCGATCA GACACTGCGC AACTGGAGAG ATATGTCCAG CAAGGTGAGC 
TCCATCATCG ATTCTAGTAA CTCCTTCAAA CGCATCAAGA TCGCAGCATC 
GCAGCTGATT CCATCCAAGG AATCCACCAT GAAAGTTTCT GCCACTGTCA 
AGAAGCTAGA AGCAGTAGCT TCTGGGATCC CCAAGTTCAC TCAGCTTCTC 
AGCTTGCAGA ATGACCAAGC AGTGTTACAT CATCGACCGG TTATCATCTT 
TGTTTCGATC CATGACAGGG TAGTTGGCAG AGTCGATGAG AGGAAACAGG 
CCATCGAATT CTTGCTTCAC ATAGACAAGA ATGGATCATC CTCTCCAGAT 
GGTTGTGTGC TTCCCATTTG GGGTGTCAAA GGAGTAGGTA AAACCACGAT 
TGCGCGGCTC GTATGCGACG ATCGCAAGGT GAGGAGCCAT TTCTCAATGA 
TTATATGGGT GAATTGCAGA GAATATACTA GTCCAGCCAT GGCCTTGGTA 
AAGTCATTGT GCAAGAAGCT TGGTTTGAGT TCTAACGTAA CCATTAATCT 
TTCAAGTGTG ATCAGAAAGG CTAAGAATGG AGAGATTTCT ACTTGTTCTT 
GATGGTGCTT CTAGCTACCC CAGGGGAATG AATGACATAC TCGATACACT 
GTTCATGAAA AGTAGAGCAG GAAGCAAGGC CATCATTACC ACTATGTACC 
AACATCTGGC AACTAAGATC AATAAGCATG AAAACTTACC TGTAGGGTTC 
CTGGCAATGG AAGATCTCGG CTGCATGTTC ATGGAAAATG CCCTGGGTGG 
TGCACACCCT GAAGAATACC AGAAATTACT TGTTATTGGA AAGAAGATCG 
CTGTGACATT GAGGGTGTGC AGCCCTTTAG CTGCAAAAGT TGTGAGTGGA 
CTGCTTCGAG AAAACCTCAA TGAGAAGTAC TGGTACATTG TTCTGAATCG 
CTGTCAGCAG TTCGTCGCAT CCAGTTCCAG GTTTGTTACT CCATTTATTC 
TGGGTTGTAA GCTTCTTCCC AAACACCTGC AACGCTGCTT TGGGGTGTTG 
GGTACATACC CTCGCTGGAC CTTCACAAGG GAGGAATTGA TAAGCTATTG 
GATGAACAAC TGTGTCGTCG TCAGTGAAAA TTGTATGAAA AATAGCATAG 
AGAATGTTGC GACTGATTAC TTTGATGATT TGGTGAGGAA GGCATTCATA 
CAACCATCCC ACATCCCAGG GCTGTACAAA GTGGATGACA TGCTAAGAGG 
CATAGCTCTG TACATAGGTC CAATGCCTGT TCCAAAAACA AGAATACATT 
TAGCGAATTT GATTGGGGAA GGATTTTCCA TCCACGAAGA CTTTTGGTTG 
ATGAGACTAG CAGAGTAGGG TTATAGATCA GAGCCTAGTT GAAATAAAGT 
TATAAGGTTT GATATTTGTT TC

Gene models with high sequence identity

AT3G14460.1 [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
E-value: 2e-13; Score: 74.70

InterPro Scan Digest

Program	Description	E-value
HMMPfam	NB-ARC	6.9e-10
HMMPfam	NB-ARC	1e-13
superfamily	P-loop containing nucleoside triphosphate hyd	1.6e-09

See the detailed result >

AT3G14460.1

Model type: Protein coding
Short Description: LRR and NB-ARC domains-containing disease resistance protein
Computational Description: LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G14470.1); Has 38623 Blast hits to 22788 proteins in 858 species: Archae - 54; Bacteria - 2838; Metazoa - 8237; Fungi - 658; Plants - 25379; Viruses - 2; Other Eukaryotes - 1455 (source: NCBI BLink).
Link: InterPro Scan - TAIR