K21344

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	desaturated green (PATO:0001272) (Cauline leaf::Color::pale)
	rosette leaf (PO:0000014)	increased size (PATO:0000586) (Rosette leaf::Shape::large) increased width (PATO:0000600) (Rosette leaf::Shape::wide) desaturated green (PATO:0001272) (Rosette leaf::Color::pale) present in greater numbers in organism (PATO:0000470) (Rosette leaf::Number::many) abnormal (PATO:0000460) (Rosette leaf::Others)
	sporophyte vegetative stage (PO:0007134)	decreased speed (PATO:0000304) (Adult plant::Growth::slow)
	seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997) (Seed::Number::few)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21344

Determination of introduced cDNA(s)

J023109D15 - Rice Full-length cDNAs - Original: J023109D15

full reading [+] show sequence

GGGGGGCCGT TGAAGAGAGG AAAACCTAGG CTAGTTGGCG AGCTCGCCCC 
ACTCCGTCGG CGGCCGCGCC TTCCCTGTGC TGGAATCCAG CGGCCGCCGG 
AGACGGCGAG TTCGACGCCG CGGCTGCGCG CGGAGACGTT AACCCTGCGG 
CGGCTCCTAC CTAGGAGGTG TTCTTACTGG TTGTTATAGC GATTCTCTGT 
TTGGTGCCCA TGAGCAAGAA GAAGAACAAG TCTCAATTGC CAATAAAGGC 
GCCGTTGAAA GATGCTGAAC AAGGAATAAC TTCGGATTAC ATTGGAGGAG 
ACGCTCTTGA TGACCTATTA TCGAAGCTTA TTAAGAGCGT GGAGGTTGCA 
AAGGCTTCAA GGGAAGGGTT GCCGGAAAAG ATATGGATGA AGCGACAATT 
TGCCGTTGGG GTCAATGATG TCACAAGGGT TCTTGAGCGA ATGCCTGCTG 
CTACTGCTGC CACCCATTCT GGTCACTCTT CTACTGAAGC AATAACTGAC 
AAAGCTCTGT GTAGAGCTCC TCCGGTGCTT CTTCAGGTTG TCCTTGTAGC 
TGCTGATTGC AACCCTAAAT GGTTAACAAA ACACATACCA ACCCTGGCAT 
CTACAAGGCA GGTTCCTGTG TTGTGCCTCA AGGACAACAA AGAAAGCTCA 
CTGAGGTTAG GTCAAGTGGT GAATGTCAGA ACAGCACTGG CCATTGGAGT 
AAAGGCCAGA GATAGCATAA TCAATAAGGC TATTGATGAA GTCCTGAAGA 
CTGCTAATCT GGTTGCCAAG GAACCGTAAC TGAGCTTCTG GTCCAATCTC 
AGTGACATAA TGGGCGAATT TATTTTTAAA CAAGGCAGAA GCTCTGCCTC 
ATTCCACTAA TAAAGAATAG ATATTGACCC AAGAAAATGT TTGCACCAAA 
AACTGATAGG TGAATTTTGG ACCTCTGGGT GCTCAGCATT GCAGTAGCAT 
CTTGACAGGA AGTCATGAGG ATGAATGGGC ATGCAGTTGA GAATTTCGCG 
AAGGAAATCA AGGATGCTGC TGAACTGTGG CGTTTACATC TGAAGAACTT 
TTTCTGCCTG TATTCATGAA GATCAGGCCA GACCAGGCTT GTTTGTTAGG 
TAGGTTCATT CTGTTTAGTT GAATTTGTGG ATCATAGAGC TAGCAAAGTT 
GCTCGCCTAG ACTGTAGGCT ATATTATGAG CAATTTAGTG CGTATGTGTC 
CACTATGTAT AATGCCATTT GCAGCCTTGT GGATATCTGC CTTATGTTGT 
TTGTGTTCAA CCTTAATTTG GACGATATAA ATCATTATCA TAACAAACAT 
CCTTAATACA TAAACCAGGA TAGATGTACT AACGTTATT

Gene models with high sequence identity

AT4G01790.1 [+] show detail - Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
E-value: 3e-27; Score: 120.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Ribosomal protein L7Ae/L30e/S12e/Gadd45	1.6e-05
superfamily	L30e-like	3.9e-10
Gene3D	no description	0.00055

See the detailed result >

AT4G01790.1

Model type: Protein coding
Short Description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Computational Description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); Has 95 Blast hits to 95 proteins in 35 species: Archae - 3; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR