K17138

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17138

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17138

Determination of introduced cDNA(s)

  • J033088N21 - Rice Full-length cDNAs - Original: J033088N21

    full reading [+] show sequence

    Nucleotide sequence: J033088N21 - full reading 
    GGCTGCCCCC CTCTCGCTCT CCCACCACCG TCCATCCCAC TTCCACGCGC 
    ACACAGCAAA GCAAACCAAC ACCAAACCAA ACCAAAGCAA GCTTCGTTTC 
    CGCTGCCCCC CCACAGGCCA CTGGAGGATG AAGAGCACGC AGCATCGCCT 
    CTACCGGCGG CGCATGGCAT AGGCATCGCC TGCCCCCACC CCGCCCCCGC 
    CCAAGAATGA GAGCTTGGGC CTCCACTACA AGAGATAGAG ACAGACCCAC 
    CACCATCAAG AACATCAGGA GGAGAAGTAG ATAGATGGGC AACTGCGGGA 
    CGCGAGAGGA GAATGCCGTC GTTGCGGCGC ACGCCCAAGT TCAGCAGCTC 
    CATTTGTTAC AACATCCTGT CAAGAATGCT GTTGCAGAGA GGAAGCACAC 
    CCGCATCTCA TCAGATATGA GTGATCCTTC AACACCTAGG AAAATTGAAG 
    ATGCCAAGAA CATCTCCATA TACAATGATG TGATTGACTT CACATTGTTT 
    GAACTCGAGA CTATCACAAG GAGCTTCCGT GCTGACTACG TTCTTGGTGA 
    AGGAGGGTTT GGGACTGTTT ACAAGGGCTA CATAGATGAG AATGTCAGGG 
    TTGGTCTGAA GTCACTACCT GTTGCAGTCA AGGTGCTCAA CAAAGATGGA 
    CATCAAGGAC ACAGAGAATG GCTTACTGAG GTTAGGTTCC TTGGGCAGCT 
    AAGACATCCA AATTTAGTCA AGTTGATTGG GTATTGCTGC GAAGATGACC 
    ACAGGCTGCT TGTGTACGAG TTCATGTTTC GAGGAAGTCT AGAAAACCAC 
    TTATTCCGAA GGACAGCTAC TCCACTATCG TGGGCTACTA GGATGTCGAT 
    TGCATTAGGA GCTGCCAAAG GGTTAGCTTG CCTCCACAAT GCTGAAAGGC 
    CAATTATCTA CAGGGATTTC AAGACATCAA ATATTCTGCT GGACTCAGAT 
    TATACTGCTA AACTCTCTGA CTTTGGTCTG GCAAAAGCTG GCCCAGAAGG 
    CGATCAAACC CATGTATCAA CTCGGGTGAT GGGAACATAT GGTTATGCTG 
    CCCCTGAATA TGTGATGACT GGTCACTTGA CTGCTAGAAG TGATGTCTAC 
    AGCTTTGGTG TTGTCCTTCT TGAACTCTTG ACTGGGCGTA AGTCCATCGA 
    CAAGTCACGG CCCAGCAGGG AGCATAGCTT GGTTGACTGG GCCCTCCCGA 
    AGCTGAACGA CAAGAGGAGG CTTCTCCAAA TCATTGACCC AAAACTGGAG 
    GGACAGTATT CAGTTAGAGC TGCCCACAAA GCCTGCAGCC TAGCATACTA 
    CTGCTTGAGC CAAAACCCAA AGGCGAGGCC TCTTATGAGC GACGTCGTTG 
    AGACTCTTGA ACCATTGCAG GGCAGTGGTG GAAGTGATGG AGCTGTTCAA 
    TCTGTTCTTG GCAGTGGCCT TCCGAGCTAC AGAGTAAACC GCAGACTAAT 
    GACGAACAGA GTCCACTGTA GGGCGCTTCC GAACCCCAAG TGCTCCCCTG 
    CTGTCCCAGC ATGCAGGGTG AGATGAGAGT GTGCTGTTTC AGTTGCTCCT 
    GGAATAGGTT CAGTTGTACA TTGCAAGTCT AAACCGTTGA TGGTGCGTGA 
    GTGTGCACAC CTGCGCTGTG TGCTTTTGGG TTTTATCTTT TTTCTTTTTT 
    TTTTTTTGGC TTTCTCCCCC AGTTTTCAAC CTGTAAATTT GCTCTGCATG 
    GTGGTGCTTG TAAGGCCCTC TAATTTTCAG TGGTCTTATG TGTTGTTGAC 
    TGTGTTTTGC CCTGCCAAAA CCGGCAAGGT TTAACCCCAG AAATGAAAGG 
    CTGAACTAAG AGTGCAACGA TGGTTGCTAT GCTAC

    Gene models with high sequence identity

    1. AT5G01020.1 [+] show detail - Protein kinase superfamily protein
      E-value: 1e-172; Score: 603.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    superfamily Protein kinase-like domain 5e-82
    Gene3D no description 1.3e-22
    Gene3D no description 2.9e-53
    HMMSmart Serine/threonine-protein kinase domain 1.8e-35
    HMMSmart Tyrosine-protein kinase, catalytic domain 2.8e-33
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 7.2e-165
    HMMPfam Serine-threonine/tyrosine-protein kinase 3.4e-48
    ProfileScan Protein kinase, catalytic domain 39.015

    See the detailed result >

    AT5G01020.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 117465 Blast hits to 116000 proteins in 4235 species: Archae - 97; Bacteria - 13843; Metazoa - 43298; Fungi - 9750; Plants - 33095; Viruses - 372; Other Eukaryotes - 17010 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR