K13132

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13132

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13132

Determination of introduced cDNA(s)

  • J033114L12 - Rice Full-length cDNAs - Original: J033114L12

    full reading [+] show sequence

    Nucleotide sequence: J033114L12 - full reading 
    GCTCGTCTCG CCCGCCTCCG TTCCGCCTTT GGTCCAGATC CACGCGTGTT 
    GCGGACTTGC GGTTGCTTTT GTTCGTCTTC TCCCGGAGAT TCGGCGTGTT 
    CGTGCTGCGA AATCCGAACT ACTTCTGCTG CTAAGATTTC TGCCGCGTGC 
    TAATGGCGGA GGAAGGGTAC AAGGTTGTTC TTAACGTGTA CGACCTCAGC 
    AACGGCCTCG CGCGGCAGCT CTCCACCTCC TTCCTCGGCA AGCCAATCGA 
    GGCCATCTGG CATACGGGCG TGGTGGTGTA CGGGAACGAG TACTTCTTCG 
    GCGGCGGGAT CCAGTCGCTG GCGGCGGGGA GGACGCCGTA CGGGCGGCCG 
    GTGCGGGTGG TGGAGATGGG CGAGACGCAC ATCCCGCGGG AGGTGTTCGA 
    GGACTACCTC CGCGACATCT CGCCGCGGTA CACGGCGGAG ACGTACCGGC 
    TGCTCAGCCA CAACTGCAAC AACTTCAGCA ACGAGGTGGC GCAATTCCTC 
    GTCGGCGCCG GCATCCCCGA CTACATCCTC AACCTCCCCG CCGAGGTCAT 
    GTCCAGCCCC ATGGGCCCCC TCATCATGCC CATGATTCAG AACCTCGAGT 
    CCACGCTCCG GACCAACGCC GCGCCGCAGG CCACGCAGTT CGTCCCCTCG 
    TCCGTGCCGC CGCCGCCGCC GCCGCAGAAC AAGCCCGGCG AGGGCTCGTC 
    TTCCTCGAAG CAAGAAGACA AGGCGGCCAA AGCGAAGCAG GGCTCGGCGG 
    CTGACCCGCT CGGCGGCGCG AGGGGGAAGG TGCAGGAGGA GGTGATGCGG 
    GAGTTCGCGG CGATCATGGC GAGCGGGACG CTGCGGGCGA GCGAGGCGGC 
    GGCGCTGGCG ATGCGGCGGG TCATGGAGCG GCACGGCAAC GCCACCATGC 
    AGCAGAGCTA GACGAGAGAG ACACACACAC CACCATACAT TCGACGCGAT 
    GATGCGTGTC GCAATCGCAA TTACCGAGTT TTTACGGAGT AGTTAACTTC 
    TTTATGAATG AGAAGGTGAT TTCTGTAGCG TATTGATTGT TTGTTACTGT 
    GTGTGAACCT GGACTGTTCT GCTTAAATTC GATAATCTTT CTCTTGTCT

    Gene models with high sequence identity

    1. AT3G07090.1 [+] show detail - PPPDE putative thiol peptidase family protein
      E-value: 9e-84; Score: 307.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UNCHARACTERIZED 1.8e-42
    HMMPfam Protein of unknown function DUF862, eukaryotic 5.1e-43

    See the detailed result >

    AT3G07090.1

    Model type
    Protein coding
    Short Description
    PPPDE putative thiol peptidase family protein
    Computational Description
    PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 872 Blast hits to 872 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 119; Plants - 332; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR