K08019

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08019

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08019

Determination of introduced cDNA(s)

J023059H15 - Rice Full-length cDNAs - Original: J023059H15

full reading [+] show sequence

GTTTCTCGGC CTCTCCTCCC CCGGCCGGCG CTTCTCATCT CCTCCTCCTC 
TCTCCGGCGA CGGCAACAGC TCGGGACGGC GTGGCTCGAG GCGACGGAAA 
TGTCTCTGCG GGGCGGAGCG CAAGGACGAG CTCTCCGTGC AGGAACAAGC 
TCGACGGCGG TGGCCTTTAC TCCACCACCA TCCTCTCCCA ATTCGCCGGG 
GAGGCGATCT CCTCCCTCCC TCCCATCCGC CGGTGGGGTC CTCTCCTCCC 
ACGCGCCGGC GCGCCGCCCT CTTAGACGTC GTTTCCTCCT CCGTGTCGCT 
AGATGGGTCG AGGAGCTCGG CAGCGGCGTG CGGGGATTGG GTAACAGCTG 
GGCGTCGGTG ACAAACCCCT ACGATGCTGC TGCTTCTCCC CTCGCTGATC 
CGTCCGGTGT CACACCTCAC CGCCCGTCCG GACATACGTC GTCTCCCCTA 
TTTCAATATT GAAGCGCTCG ATCCGCCGGC GTAGCGGTCG ACCTGGACGG 
CCGCCACCCA AGCGCTGTCG CACCTTGCCG TCCTCCCCGT CCCGTGCCTT 
GCCGTCGCCA CATCCATTCC CCCATCGTCG TGCCTAATGG AGAGGAGGAG 
CTTGTCGTCG ACACCACCAG GTGCGTCGAC TAACAATTAC GGGCAACGCA 
AGCAAGAAAG ATGGCGGGGA TGCAAGATGC GACTAGCTGA AAACAAGGAC 
AACGAGAAGT AAGTATAGGT AATCAGGTTG CTGTGGAGGG AAAAGGCAGC 
AGTGATGGAG GTGATGAAGG AATCAGTACG GAGGAAGAGA GAATGTGTTC 
AGCACGTGCT CAATGCGAAA ACAGAGATGG CCAGTTGGGG AAACTAAAGT 
TTCATTTGCA AAGCATACTA AGGGCGAGTT CAGTATTAGA ATGTCTCATT 
CTTATTTCCA TCGCCGCTGC CTCTCATCTC CACCACCATT GCCACCTCCA 
CGCCTCTCCA CCAGCGCCCC ATCCTCCATC TAGACACGCT TCCTGAGTTC 
GAGTTCAAGT ACACCAGATA GTCAACTGAA GAGAATAAAC TACTGCAATC 
ACCTTTTTTC AGGAACATCA CTTTCATCAA AGTTATTCTC TCCTAGGCCC 
AATTCAGTTA GGCCTGACAA TTTGCCAACC CATATTGTAA ATGGTCCATA 
AAAAGCATTT GTTGATATAG TATTTTGAGC AAATGTTGAA AGATCAGGTA 
ATTTCCCTGA CAAACTGTTT GTTGACAAAT TAAGAACCTG CAGATTTGTG 
C

Gene models with high sequence identity

AT1G72180.1 [+] show detail - Leucine-rich receptor-like protein kinase family protein
E-value: 2e-08; Score: 57.40

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Leucine-rich repeat	0.0075
HMMPanther	LRR RECEPTOR-LIKE KINASE	5.7e-05
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	5.7e-05

See the detailed result >

AT1G72180.1

Model type: Protein coding
Short Description: Leucine-rich receptor-like protein kinase family protein
Computational Description: Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HAESA-like 1 (TAIR:AT1G28440.1); Has 222922 Blast hits to 143384 proteins in 4612 species: Archae - 143; Bacteria - 22250; Metazoa - 69718; Fungi - 11673; Plants - 90830; Viruses - 408; Other Eukaryotes - 27900 (source: NCBI BLink).
Link: InterPro Scan - TAIR