K02019

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02019

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	stem (PO:0009047)	abnormal (PATO:0000460) (Stem::Shape::zigzag) abnormal (PATO:0000460) (Stem::Others)
	stem internode (PO:0020142)	increased length (PATO:0000573) (Stem::Shape::long internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02019

Determination of introduced cDNA(s)

J033027C02 - Rice Full-length cDNAs - Original: J033027C02

full reading [+] show sequence

GACGATTCGG TGAGTCTGTG AAGAGGAACC GACCAAGCAA ACCCTAGCCG 
CCGCCGCCGC CGCCTCCGCG TCCGCCTCCA GATCCGGCCG TCGGCATGGC 
GATGCGCGCT CTGGTCTCCA AGCTGAGGGT CCCCGCGGCT GCTTCCCGCC 
GGGCTCTTCC GCCGTTTCGA TCCTTCTCCG CCGCCTCTCA GGATAAGGTT 
GGCGGAACTA CTGCACGCGC TGCCGCTAAA GAAGGGACTC CAATTTCTGA 
TAATAGCAGG AAGGTCGAGA AGTTCTACAG GAAGCTGCGA TGGTATCAAG 
CCCTTGGCAA CTTCCTTGGG TTCAACACTT CAGTTTATTT ATTCTATCGC 
TACCACTACA CCTAAGCTAA GGAGGAGCAA ACTTAGTACT CTGATTGTCA 
CTCTATTTAT GTATCCATAT ACCACCTAAG TACTGAACAC TCAATTGCAT 
GTATGAGTAC GTACTTAGTA CTCTGATTGT CACTCTATTT ATGTATCCAT 
ATGCCACCAA AGTACTGC

Gene models with high sequence identity

Not founds.

InterPro Scan Digest

See the detailed result >

J023044A22 - Rice Full-length cDNAs - Original: J023044A22

full reading [+] show sequence

GCCCCGCGTC TCCTCTCCTC CCCACCCGCC CCGCATCTCT CCATCGGCCG 
GATCGGCAGG AGAGCGCGGC CGTACGCACG TACGCCGTCC CCGCGGTTTC 
TTCCCCCCCG GCGCCCAGCC CGCCCGCCGG GCGGCGGCCT CTCCTAGCAA 
CTAGTAGGGG ATGGGCGTGA TATCTCGGAA GGTCCTGCCG GCGTGCGGGA 
GCCTCTGCTA TTTCTGCCCC GGGTTGAGGG CAAGATCAAG GCAGCCTGTT 
AAGAGGTACA AGTCGATCCT TGCTGAGATC TTCCCCAAAA CGCAGGATGA 
AGAACCGAAT GAGAGAAGGA TCGGGAAGTT GTGCGAGTAT TGCTCGAGGA 
ACCCTCTCCG AGTGCCCAAG ATCACGGTTT CCTTGGAGCA AAGGATCTAC 
AAGGAATTGA GAAGTGAACA GTATGGCTTT GCAAAAGTGG TGATGCTAAT 
ATACCGTAGA TTGTTGGTTT CTTGTAAAGA GCAGATGCCA CTATTTGCAA 
GTAGCTTATT AAGTATTGTA CACACTCTTT TAGATCAAAA GAGGCAGGAT 
GATATGCGCA TCATAGGATG TGAAACCTTG TTTGACTTTG CAGTTAATCA 
GGTGGATGGT ACATATCAGT TCAATTTGGA AGGGCTAGTC CCAAGACTAT 
GTGAGCTATC TCAAGAAGTA GGAGAGGATG AGCAGACCAT TGCCCTACGC 
GCTGCAGCCC TGCAAGCCCT TTCAGCTATG ATTTGGTTCA TGGGAGAGCT 
CTCACATATT TCATCGGAAT TCGATAATGT GGTTCAAGTA GTACTTGAAA 
ACTACCGACC TCAGAAGATG CAAAATGATG GTCAAGTTAC CAAGGATTCA 
AGCGACCAGT TGGAGCAAGA AGCCCCCAAA ACGGAGGACT CCAAAGCAGA 
GGACTCCAAA ACGGAGGACT CTTCCCCCTT TGTCATCTCT GCTGTCCCCT 
TGTGGGAGAA CATAGTTAAT GTTAAGGGTG GAGTTAACCT TACTGTGGAG 
GAAGCAAAGG ATCCTAAGTT TTGGTCCAGA ATATGTGTGC ACAATATGGC 
TAGGCTTTCC AGGGAGGCAA CAACATTCCG TCGTATCCTG GAGTCTTTGT 
TTCGGTACTT CGGCAACAAC AGTTCATGGT CACCTGAAAA TGGACTTGCT 
CTGTGTGTAT TGTTGGACAT GCAACTGTTA GTGGAAAACG CAGGACAAAA 
CATGCACTTA ATGTTGTCTC TACTGATAAA GCATATTGAA CACAAGACCA 
TGGTGAAGCA ACAGGAGATG CAGCTTAGTA TCGTGGAGGT AGCAGCCACC 
CTAGCAGAAC AATCCATCGC TCAGGCTTCA GCAGCAACTA TAGGTGCCAT 
AAGTGATCTT GTCAGGCATT TGAAAAGGAC ATTTCATATT ACTCTCGGCA 
GCAAAGATTC GGAGCTAGTA AAATGGAATG AAAAGTTCCG AAAGGCTATA 
GATGATTGTC TAGGACAGCT GGCAAAGAAG GTAACTGATG CTGGACCAGT 
TCTGGACATG ATGGCCGTGA TGCTAGAAAA TATTGCTAGC ACTCCTGTTG 
TAGCTAGATC AACTGCAGCT GCTGTTTATC GTACAGCTCA AATAATTGCT 
TCTGTTCCAA ATATTACCTA TCAGAATAAG GTGTTTCCAG AAGCTCTGTT 
TCATCAGTTG CTCTTAACGA TGATCCACCC GGATCATGAA GCTCGAGTAG 
CTGCGCACCG CATTTTCGCT ATTGTCTTGG TCCCCTCTTC CGTTGCCCCC 
TCGATTCAAG CAAGTGTATC AGGTCAGGCT AAGAAACATG ACATGCAGAG 
GACACTCTCT AGGGCTGTCT CGGTGTTTTC ATCTTCAGCT GCCATCTTTG 
ACAAGTTGAA AAAGGACAAG CACTCAGACA ACTCACAAGG TGATAGCAGT 
GGCTTGCATA GTATCAGTGA AGAGTCTAGT AATGCCAAAC GTTCGAACCT 
ACCTGTGTCT CAAAGTCGCC GACGTAGCAT GAAAATTCCT AATTTTTCCA 
TGAAGAGGGG TCCTTCAATG GCTATGAGAG CTCCTTCAGT AGCCCTGAGA 
GCCCCTTCCA TATCTCTCAG AGTTACTTCG ATGTCTTTGA GAGCACCTTC 
CATGTCTATA AAGGCAGACC ATGGTTCCTC AAGCCATCCA GAAGATGAAA 
TGGAATCAGT TTTGCTGAAG CTGAGCAGTC GCCAGATCAC ACTTTTGCTT 
TCATCCATTT GGGCTCAAGC AACATCTCCT GAAAATACTC CAGCAAACTA 
TGAAGCCATT GCTCACACTT ATAGTTTGCT TCTATTGTTC TCTGGAGCCA 
AGGCATCAGT TTTTGAGGCT CTTACTCAGA GTTTTCAGGT TGCATTTTCA 
CTGAGGGGCT ATTCACTGAC TGAACCAGAT TCATTACCAC CATGTCGGCG 
CCGTTCCTTG TTTACTCTTG CTACAGCTAT GATCATTTTC TCTTCAAGAA 
CTTTCAACGT GTTACCTCTT ATTCCAATAT GTAAACAAAT GCTGAATGAG 
AGAACAGGTG ATCCATTCCT CCGTTTGGTG GATGAGTGCA AGCTTCAGGC 
TGTGAAAGAT TCCGTGGATG ATCCGTCGAA AATCTACGGA TCACCAGAGG 
ATAATACTAA CGCACTGAAG TCCCTTTCAG CGATAGAACT ATCAGAGAGT 
CAATCCCGAG AATGCATTGT CTCCACAATC ATGAACAACA TAACAAATAT 
GCTAGAGGCG GAGTTGAATA GTGTGAAGAA TCAACTGCTA AGCGATTTCT 
CTCCCGATGA CATGTGTCCA ACAAGCACTC ATTTTTTTGA AGCAACTGGT 
GATAACTCAT CACCAGGATC TCATGATAAT GATCACCATC CAGAGGCTGT 
GCTGATCGAC CTGGGAAATG ACCACGATAT CTTTGGGGAA GCTTCAGAAA 
GTACAGCTGC TTCTGCAAAT GCTGTGCCTG TAACAGATCT TCTGAGTATC 
GATCAGCTTC TTGAAACAGT TGTCACAGAC CCGGCACCTC ATACAGAACG 
AGTGTCTGTA TCAACAGACA TGCCATTCAA GGAGATGAGT AGCCAATGCG 
AAGCCCTCAC TGTCAGGAAA CATCAGAAAA TGGCCTCCTT CATGAGCTTC 
TCGCAGGATA TGACAATGGA TCCCATGGCA ACCAATCAGC CGTTCCAGAC 
GGATTTGTCC CTTTTCCATG ACCCATATCC GCCTCAGGTT GGGGTGCCGA 
ACACGAATCC GTTCGTCGAC GATAACCTGT ATGGTTACCC CCAGTACATG 
AACATGAACG AAGCCAATCC ACAGCCAACT TATGAGCAAG CCCAGCAACA 
TTTCCTGAGG TTGCCGGCAT CAAGTCCATA CGACAATTTT CGCAGGGCTG 
CTGGTTGTTA GAGGTTGAGC CTGCAGCAGC AAGTCTATCA TGCCACCAAG 
TTCTTCACAT AGATGAGCAA AGAAAAGAAA TCTCAAGCCG ATAATAAACC 
GAATGATGTG GCAATTTTCC GTTTATTTTG AAAGAGGAAT ATATGCATAT 
CCGTGTGCAT GGTCTTAGAG GGTCAACCGG ATTCAACACC CACTCGATTC 
GTTCTTTATG TATAGCGGTA TATACATATA TATAGGTTAA TTCTTTTTTG 
TTTGTTTTTG CCATTGCAAC GTGTAGAGAA GAAACTGTGG GGAGCAGTGC 
CTCTATCACG AGCTATACAT GTATGTGTGT ATGTAACTTG TGTCAAATGC 
TGCAAATTGG AGAGTATATC ATCACGGAAT TGGTGTGGTC TATGAGAAAA 
AGAGGTGTCT TTCTTGAACC AGAAAGAGAA GCCTCCCTGT TGACAACTTC 
AAATGTAATT ATCATTATGT AAATGGGAGC ACCATCTTTG TCC

Gene models with high sequence identity

AT5G21080.1 [+] show detail - Uncharacterized protein
E-value: 0; Score: 842.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	UNCHARACTERIZED	1.9e-71
superfamily	Armadillo-type fold	5.3e-06

See the detailed result >

AT5G21080.1

Model type: Protein coding
Short Description: Uncharacterized protein
Computational Description: Uncharacterized protein; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 304 Blast hits to 292 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 137; Fungi - 19; Plants - 133; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR