K01017

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01017

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01017

Determination of introduced cDNA(s)

  • J013090O07 - Rice Full-length cDNAs - Original: J013090O07

    full reading [+] show sequence

    Nucleotide sequence: J013090O07 - full reading 
    GACCAGCCTG GCCTATCTTC CTCGTCCTCT TCCTCCTCCT CCTCCTGCCT 
    AGCCTATTTT GCTTTGGTCG ATTGCTGCTG CTGTGGTGGT GGTGGACTGG 
    TGGTGGCGGC TAGCGAGATA ATAAGAGTGA CTGGATAGGA TGGCGACGAC 
    GGTGGCGGCG ATGTGCGGGG CGGCGGAGGA GCGGGTGGTG GGGACGCACA 
    AGGCGCCCGG GGCGTGCCCG CGGTGCGGCG GCGCGGTGGT GGCCACCGAC 
    GTCGAGAGCG AGCGCCGCAT CCTCTGCCTC CCGCTCTGCG TCAAGAGCAA 
    GCGCAAGTAC TCCTGCTCCA GGTGCCTCCG CCGCCTCGTC ACCCTCTACA 
    GCTAGACAAA ACTTCTTGCT ACTTTCATCA CAGTGGTTAA TTTCTTGATT 
    AGGTTCATTT GCCCTTGATT AATTAAGGAT AATCCATCCT TCCTTCCTTC 
    CTAGCTCTCG TCTCGGCTAG CTAGTGTGTG CTCTTCTTGT CTAGCAGTAC 
    AACTAGTTGA TAGGGACTAG CTAGCTGATC ATCGGCAGAT GGATTAATGT 
    TTCGTCTGGT GCGATCAACC GTGTGTCTAA TCTTGCGATC AGCGGACAGC 
    AGATGTGCCT ACATGTGCAT CACGTGACGC TGTGCGTGCC TGACGCTTTT 
    TGTGTTGGTA TGTTTGTAAA ATTGTAAAAA ATGTAAATCA GGTGTGTGTA 
    ACTATGTGTT CCCAGTGTCT TGTATTTACT CCTCCAGTTA GTGAAAACTG 
    AGTGACT

    Gene models with high sequence identity

    1. AT5G10695.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); ...
      E-value: 1e-11; Score: 67.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G10695.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR