K00503

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00503

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)
T2  
cauline leaf (PO:0000013)
  • present in fewer numbers in organism (PATO:0001997)
    (Cauline leaf::Number::few)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Silique::Shape::short)
  • abnormal (PATO:0000460)
    (Silique::Others)
stem (PO:0009047)
  • increased thickness (PATO:0000591)
    (Stem::Shape::thick)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)

Invisible phenotypes

Original: K00503

Determination of introduced cDNA(s)

  • J023004O08 - Rice Full-length cDNAs - Original: J023004O08

    full reading [+] show sequence

    Nucleotide sequence: J023004O08 - full reading 
    TGGGGGCCAT CCTCTTTCTC TGAGGATCAT CATGCCTTGA GGAGAAGCAT 
    TGCTGAATCC TCTTGGCGGC CCCCTTGCTT ATCACACACA AAATTCGGCC 
    ACACCAACAA AATCGGCCTA AAGCATGACA ATTTGCACCT CATAACCAGA 
    ATTTGCAGGA GGCTTCAGGC GTTTTCAACA GACATGAAGG CCTGGCATTA 
    CTGACAACTA TTGTTGAGGG TGGTGGAAAC TGCAATCCTG CTAGTGATCC 
    ATTACCAAAC CAGTCCCTGT TGTCAGCAAG CATCATTAAC AAGATCCTCC 
    ATCTGATAGA TGCTCTAGAT CTGCTATGCC GAAGGTCATA CATTGCGTTG 
    GATCAGTTGC TTTTGGATAC CCAAGAAGCG CTGAAGATCG CATACCCGAA 
    ATGTTTATCA GGCTTATCTG CATACCACAA TACTTCCTCT ATCAGAAGGA 
    AACCAAAGCT GTAATTTTAT TCTGAGGTTA GCGCTGCGCG CAAAGAAATC 
    CGCGACGAAG CTGAAGCGAT CGGCAGAGAT GGGGAGCATG TACCGGCATC 
    TGCGTGACCG ATCTAGTAGA AGGCGGCGCT TCTCACCTGC ATGGCGGCAA 
    GAGCTCGCGC GACAAGAAAG CCCGGGCGTC GCCGGCGGCC GGCGCCAAGG 
    GCGGTGGTGC AGGTCATGGC ATGGCCGACG CATCGGCCGA GATGACCAAG 
    AGATCGGCCT ACTTCCGGCA AATCGAGGAG GACGTCGGAA CCCACCCGGC 
    GGCGATCCTG GAGCTGAAAG ACGCCGTCGG CGCGTTCCAA TCCATGGACA 
    TGGGCGAGCT GGCGAGGTTC CACTGCAGCT CGCGTGCCTG ACCGACGAGA 
    CGCAGGTTCG AGGGCTTCCC TTCAAAGAAG CTGGAGGCGC TGAGAATGGC 
    CGCGGCGCTC TACTCCAAGC TGGACGGCGT CGTTGCCACG CCGAGTATTT 
    TAAACATGCA AAAAAAAAAT TCTTACTTTT TGAAAAATAT GTATATATAT 
    AAAGGTCTTG TTTAGTTGGG GAAAATTTTT AGGTTTGATT GTCATATCGA 
    ATATACGGAT ACACATTTGA AGTATTAAAC GTAGTCTAAT AACAAAACAA 
    ATTACAGATT TCGCCT

    Gene models with high sequence identity

    1. AT4G04980.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); ...
      E-value: 1e-16; Score: 84.30

     

    InterPro Scan Digest

    See the detailed result >

    AT4G04980.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR