GT7894

CSHL Arabidopsis genetrap mutant lines

Original: GT7894

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT7894

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1601118 [Map]; Strand: c
      • AT3G05520.1 - [+] show detail - Subunits of heterodimeric actin filament capping protein Capz superfamily
        Distance: 0; Region: exon10 (CDS)
      • AT3G05520.2 - [+] show detail - Subunits of heterodimeric actin filament capping protein Capz superfamily
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: GT7894 - 5-prime edge 
    ACAGCAACTT TGACAACGAA ATATAGAACT CAAGTTGCGA GTTGACGATT 
    AGTCACTTGC CAAGCCCAAG TTCTTTCTCA ACCTCTCTTG TTAGGCTGAA 
    CTGTAAAGTG TTCTGCCATG GGAACAGAGT TCATC

AT3G05520.1

Model type
Protein coding
Short Description
Subunits of heterodimeric actin filament capping protein Capz superfamily
Computational Description
Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: nucleus, F-actin capping protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, alpha subunit, actin binding (InterPro:IPR018315), F-actin capping protein, alpha subunit (InterPro:IPR002189), F-actin capping protein, alpha subunit, conserved site (InterPro:IPR017865); Has 649 Blast hits to 643 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 391; Fungi - 148; Plants - 37; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05520.2

Model type
Protein coding
Short Description
Subunits of heterodimeric actin filament capping protein Capz superfamily
Computational Description
Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, alpha subunit, actin binding (InterPro:IPR018315), F-actin capping protein, alpha subunit (InterPro:IPR002189), F-actin capping protein, alpha subunit, conserved site (InterPro:IPR017865); Has 69 Blast hits to 69 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 15; Plants - 8; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR