GT4992

CSHL Arabidopsis genetrap mutant lines

Original: GT4992

Phenotypes

Morphological phenotypes

Original description

  • small plants
  • tiny seedlings
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
seedling (PO:0008037)
  • decreased size (PATO:0000587)

Original: GT4992

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20054920 [Map]; Strand: w
      • AT5G49460.1 - [+] show detail - ATP citrate lyase subunit B 2
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT4992 - 3-prime edge 
    CCCTATCTCA ATGTCGAATT CGAAATTAGG CAACATTACA CTAATTCGAT 
    AATCACTAAC AAACAGATCT CATTACTCCA TTAACGAATC TGGGATTGAG 
    AAAGAAAAAA AGTTCCGATT TTTACGCAAC CCTCCTCGTA AATATCGAAA 
    CTTTGGTATC AAAAACACGA ATCGGAATCA AGACAGATCT AAGAAAAAAA 
    GTTACGAATT GTTAGAAGAG AACAGACCTG GTCACGACCC GAGTCGAGTC 
    TGTGATTAAG GAGAGAATAA ATGGTGGTAG AGAGAAAGAG AGAGGAATGG 
    TTTATAGAGG AAGCACCATT AATATAGAGA AATGGGAGGG AAACAAAAGC 
    TTCTCACAGT CATGTGGCTT ATTGGTAGGT AGTTAGTTCA CAACTTCTTT 
    CTACCCAAAA TTGATTTCTC TATCTTACAT TGACAAAGAG AAACACCTAA 
    CAGTTTTTTT TTATTACAAA TTTGTTTTTG TAACATCTTT TGTTTTATTT 
    TATTGCAATT TTGG

AT5G49460.1

Model type
Protein coding
Short Description
ATP citrate lyase subunit B 2
Curator Summary
One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)
Computational Description
ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR