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Mutant Lines
GT24388

GT24388

CSHL Arabidopsis genetrap mutant lines

Original: GT24388

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24388

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 3511003 [Map]; Strand: c
- AT3G11200.2 - [+] show detail - alfin-like 2
  Distance: -451; Region: promoter
- AT3G11200.1 - [+] show detail - alfin-like 2
  Distance: -376; Region: promoter
- AT3G11210.1 - [+] show detail - SGNH hydrolase-type esterase superfamily protein
  Distance: 0; Region: exon6 (3UTR)

TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATTA TAGCAGAGAC 
ACTTGTAATG TAAACAATCT AAAGCAAAGC TTTATCACAT TAAGACAGTG 
AATTATGTGA AGATAGGGTC TTGTTGTTGT TGTTGTGTGT GTTGAAATGT 
TTAGTCCCAT TGTTCTTCCC AGAAATAAGT CCATTCTGAA GAATTTACTG 
TCTGTTTGCC ATCTGCTGAA ACAAGATCAT AAGGAGAGTC ATCTGCGAAT 
TCTGTTGGCA TTGATTTCCA GTGAAGTGAT GGATGCCATT CCGCTTCTTT 
AACCACTCTT AGTATCTCTC CCGCTACTAT TTTGCTTCCT TGTGCTGACA 
AATGAATCCC GTCTCTGTAA CAAACCAAAC TATACCGTTA AAACATTTCA 
ATGAACATCG TCGATACTCC ATTCCCGGTT ATCGCATTTG GAAACTCTGA 
AAAAGTCATA TATATCAAAG GTCTCTCTAT ATTTCTTCAA AACTCAAAAA 
ATACTTACGT GAAGCAAACA GTTTTCCAGT CATCTGCTTT CTGAAAAGTA 
AAGAAAAGAT CAACTACTTC TAGGCCGAGT TCTTGGCACA CCTCTACACA 
AGCATCTGAA TAAGTCTTGC AGAGGTCGTT TGTGCGGATT AC

5 prime edge [+] show sequence

Chromosome: 3; Position: 3510921 [Map]; Strand: c
- AT3G11200.2 - [+] show detail - alfin-like 2
  Distance: -369; Region: promoter
- AT3G11200.1 - [+] show detail - alfin-like 2
  Distance: -294; Region: promoter
- AT3G11210.1 - [+] show detail - SGNH hydrolase-type esterase superfamily protein
  Distance: 0; Region: exon6 (3UTR)

CTATATCTGA TTCAGTTTCG CTCGAAAAAC GTTACCATTT TAAAGTTTAT 
ACTTATCTAA ATCTTAAATC ACAGAAACAC ACCAAGTTTG TGTTCAAGTA 
ATTTCTTTTT TTCTTGTTTA CATTTTACAG ACATTAACAA ATGTCTGAAA 
CTCATCACAT AACACTCCTC CAGACAGGGG TTTAGTGTTT TGAAGGTAAA 
ATCACAAAGT AACTAAAATT TGGGCCGATA ACAAAAAAGT CGCTTAGGAG 
ATTGGACTTA TTTGGGCCTA AAACCTAACA CTTAAGGGCC CAACTAAAAT 
GCCATTTACC TAAAAAGCGA CGCATCTTCG TCTACTACCA AACCTTTTCG 
CTGACGCAAC CAAACTCCCA AAAATAAAAA TAAAGTTTTT ATTTTCCCCC 
CCTCTCTAAT TTTTCTTCCC CTTCTTGTCC CGTCGGCTTC TCCCCCTCCC 
CTTCCAAATC TATGGTTCTC TCTCTCTTCA GGCCCAAACG CATCGGGTCT 
CAAAAACCAT TGATACAAAC CTCGATCCTT GTCAACTAGT ACTGATCTAA 
AAATCTTAAA AAAATCTGTA AAGATAGGGC CCCCGCACCC GTTTCCTCTA 
ACCCTCCCAC CGTTAAAGAA ATCTTCAAAA ATAATTCCGC TC

AT3G11200.1

Model type: Protein coding
Short Description: alfin-like 2
Curator Summary: AL2 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.
Computational Description: alfin-like 2 (AL2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 1 (TAIR:AT5G05610.2); Has 1527 Blast hits to 1482 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 758; Fungi - 235; Plants - 458; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11200.2

Model type: Protein coding
Short Description: alfin-like 2
Curator Summary: AL2 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.
Computational Description: alfin-like 2 (AL2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 1 (TAIR:AT5G05610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11210.1

Model type: Protein coding
Short Description: SGNH hydrolase-type esterase superfamily protein
Computational Description: SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Link: InterPro Scan - TAIR