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GT23966

CSHL Arabidopsis genetrap mutant lines

Original: GT23966

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23966

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 323435 [Map]; Strand: w
      • AT4G00753.1 - [+] show detail
        Distance: 402; Region: intergenic
      • AT4G00755.2 - [+] show detail - F-box family protein
        Distance: -1547; Region: intergenic
    Flanking Genome Sequence: GT23966 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TAGTCTCATG TCACTCTCTT 
    CAAAGCTTCT TTAAAAAAAA TTATTATATA AAAACAAACT GAAATTCCTT 
    TTGATAATTT TCAAAATTTA CAGTTATTGG TTTTCGTTTT ATTTACGTAT 
    GCATGAATAA ATTTATCAAA CACATGAACT AAACCAAAAT AGAGGTGGTA 
    TGAGAAAAGA ACAGGACTAA AAGAACTTTG TTCCTCGAAA AAAAGTTTGA 
    ATTTCTTTAT TATGTAAGTA TTTTTTTTTA TCTTAAAAAT TCATCAAAAT 
    ATCTTCCTCT TTTATTTTGA ACATGATACA CACAAATGTA AGAACCCAAA 
    GAAGCCAAAA CATCATTAAA TTAAACAAAA CAAAAAACAA AAACAAAAGA 
    ACCTACAAAG AGACTTGGAC ATCTTTTAAT CCCAAACCAG ACCTAATCAT 
    ACAATCATTC ATGATTTAAC TTGCGATATA CAAAGCTCCA TCTCCAACAC 
    TTCACCACGT AATAAACTAT TAGGAACAAA CATGACATTT TTATCTTTAG 
    GGGTTTCAAA ACTCACTTCA AGAATTCTCT TCATCTCACT CGACAAGATC 
    GAACCGATAC CCAACCGAAT

AT4G00753.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT5G37890; seven in absentia (SINA) protein, putative
Link
InterPro Scan - TAIR

AT4G00755.2

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR