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GT23467

CSHL Arabidopsis genetrap mutant lines

Original: GT23467

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23467

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2970018 [Map]; Strand: c
      • AT3G09680.1 - [+] show detail - Ribosomal protein S12/S23 family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT23467 - 5-prime edge 
    GTGTAGTAAT ACTTTGTTAA TCACCCTGTT GAAGCTACGA AGTTGCTATA 
    ATTCGTAGTT TTTTCTTATA AACGTTGGAG TTATTTGGTC TGAAATGTGG 
    AAATTATGAT TATGATTTTT GATTTTTTTC CTTACTACAC TCTCCTCTTG 
    TGTTAAGTAT TTGTGATTTA GATTATAACT TTATGTTCTT TATCAACTCC 
    GAATTTGTTT TATATGTTCT GAGTGAGTTG ATTTCATCTG ATGAAATGTC 
    CTTTGGTTCT CAATTTCTTT TATCTTCTAT TTGAATATCT TCAGTAAGAC 
    ACGTGGTATG GGAGCTGGTC GCAAGCTTAA GCAGCTTCGG ATTACTCAGA 
    GGTGGGCGGA CAAGCATTAC AAGAAGTCTA ATCGAGGCAA CGAGTGGAAG 
    AAGCCTTTTG CTTGTTCATC TCACTCTACC AGAATCGTTC TTGAGAAAAT 
    GTAAGTTTGT ATAAACATAT ATATTTACCA TTTCTTGATT TTGTTAGTAA 
    TATAAATCTT GACTTTGATG ACACTCTG

AT3G09680.1

Model type
Protein coding
Short Description
Ribosomal protein S12/S23 family protein
Computational Description
Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, nucleolus; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT5G02960.1); Has 9046 Blast hits to 9043 proteins in 3116 species: Archae - 259; Bacteria - 5143; Metazoa - 487; Fungi - 298; Plants - 975; Viruses - 0; Other Eukaryotes - 1884 (source: NCBI BLink).
Link
InterPro Scan - TAIR