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GT23198

CSHL Arabidopsis genetrap mutant lines

Original: GT23198

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23198

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17955164 [Map]; Strand: w
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT23198 - 5-prime edge 
    CTCTTCTGTT TGACATAATA TAATAAAAAG GGAGGGAGTC GTTGGCGTTT 
    GATATTGAAC AACCAAGGAA GGAGAGCCTA TCAAACCACA TGCTTGCATC 
    ATCTCTTTTA GCCAACTCTG CCTCATAATT ACTTTCTATA GGAGGCCAAG 
    CTTTCCTTCT TCTTTCTCTA TTAGTCTGAT CAGTTTGGTT CATCAAATCC 
    TTTTTCTCCC ATGGAAGAAA GCAACAACTC GGCCGTTGTG GATTTTCCTG 
    ACAACTTTAT GGACCAGCTC TTGTGGGAGG AGTGCTGGGA AGAAGAGGCA 
    ACGCAGCATG ACCAGGCATT ATCATCACCA TCACCATCAG GGCTGAAGGA 
    GAGGGTGGCT TGCGCCATGG GGCACCTGCA AGAGGTGATG GGAGAGAGGG 
    AGTTGCTGAT CCAGCTGTGG GTGCCTGTTG AGACAAGGAG CGGCCGAGTG 
    CTGAGCACGG AGGAGCAGCC TTACTCTATC AACACCTTCT CCCAGAGCCA 
    GAGCCTGGCC CTCTACAGAG ACGCTTCAGC TGGCTACAGC TTCGCAGCAG 
    AGGTTGCGTC GGAGCAGCTG TTGGGGCTGC CTGGGCGTGT GTTCCTGAGG 
    AGAATGCCTG AGTGGACCCC AGACGTTCGG TTTTTCAGGA AGGAGGAGTA 
    CCCTCGCATT GGATACGCCC GCAGGTATCA GGTTCGAGCC ACCCTCGCCC 
    TCCCACTCTT CCAAGGAACG TCCGGGAACT GC

AT4G38340.1

Model type
Protein coding
Short Description
Plant regulator RWP-RK family protein
Computational Description
Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G76350.1); Has 720 Blast hits to 573 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 7; Plants - 646; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR