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GT21594

CSHL Arabidopsis genetrap mutant lines

Original: GT21594

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21594

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 301628 [Map]; Strand: c
      • AT1G01830.1 - [+] show detail - ARM repeat superfamily protein
        Distance: -899; Region: promoter
      • AT1G01830.2 - [+] show detail - ARM repeat superfamily protein
        Distance: -782; Region: promoter
      • AT1G01830.3 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT21594 - 5-prime edge
    CTTCCGTTTT TGAATTAGAT TCATAGTCAC AAGTTTATTT TTGTTTTGAG 
    TGTGTTTCTC TCAGTGACTC GCCTAAAGAT CATACTGCAT AATTCTGTAA
    AATCTTGCTT AAACTCTACG TGTGTATACT TACTGAATCT CTCGTAATTT
    CACAGATCAA ATTTTGGCTG GATGCAACCA TTTTCACACT CAAGTCAACT
    ACTAGATTGA AGGTATAAAC TGTACACAAA ATCTTTCTTT AGATCATCCA
    CTAAAGATTA CTACTAAATT TTGGGCTAAT TTCAATATTT ATTAGATCAC
    TCAGTATCTA ACTTCCTCAC ATTGGTGCTT ACAAGTTACA ACTTGTGTTT
    GTGGTCTAAT GAATAGAGAG ACAGAGACTT CCTATTGACT TCTCTTCAAA
    GAAAAGTCTG CAAGTTAACT TTTATCCGCA GCCAGATTTT TCCTTTCTGT
    TACTATCAAC ACATTGAATC ATTCTGATCA GAAAATTACA GCTTGTGTTT
    CCCCTTTTTA AGAAAACTTT CACCAATCAC GAAACTAACC TTTACGAGTT
    TTGAAAAGTT TTTTGCATTG ACAATGATTG TTCATGGAGG GTGAGTATAA
    TACGTGGCTG TTAATGAGTT TGATGTGTTA TTCATATGAT ATATTAGGGA
    GAAGCATTTA ATGGATATGC ATCTAGAAAC CACTCGAAAT GATATGTCGT
    GTGGAAACTT CCTTCTTTTC TTAAGCAATG GCTTGTGTGT ATTATTAGTT
    AGATGTTGTT TTCATCTATA CTTATTTTTT TTTGTCTTCT

AT1G01830.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01830.2

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01830.3

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3429 Blast hits to 2144 proteins in 215 species: Archae - 2; Bacteria - 14; Metazoa - 502; Fungi - 465; Plants - 2072; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR