GT19051 - RIKEN Arabidopsis Genome Encyclopedia
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GT19051

CSHL Arabidopsis genetrap mutant lines

Original: GT19051

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19051

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19051 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTATTCGCCA TTCTACCCGA 
    CCGGATCGTA CCGGTATATT CTTCTCTCTC GA
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 70581 [Map]; Strand: w
      • AT2G01050.1 - [+] show detail - zinc ion binding;nucleic acid binding
        Distance: -697; Region: promoter
    Flanking Genome Sequence: GT19051 - 5-prime edge
    AAATTCTAAA AAAAAACTGA TAATTATCAA ACCTAAAAAA AAAATTTTTT 
    TTGGCAAGGA ATTTTGGGAA AAACCATAAA AAAAATTTAA TTTTTTTTTA
    TAAAAAATCC ATAGAAGTTT TTTTTTTTTT ATATAACCAA AAAAAATATT
    TCTAAGTGGG AAAAAAAAAA CTTTTTTTTT CCAAAAAAAA AACCTTTTTT
    CCCACCTTTT ATTTTCCCTT ACCTTTTTTT AAAAAAAATT AAAAAAAAAA

AT2G01050.1

Model type
Protein coding
Short Description
zinc ion binding;nucleic acid binding
Computational Description
zinc ion binding;nucleic acid binding; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G31430.1); Has 369 Blast hits to 365 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 367; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR