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GT18455

CSHL Arabidopsis genetrap mutant lines

Original: GT18455

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18455

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17024489 [Map]; Strand: c
      • AT3G46330.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT18455 - 5-prime edge 
    CTGAACAGGT TTTATCATGT TTAGATTGTG AGCTTACCTC TAAATGAGCC 
    ACCTTACATA GAATCGGAAA CCGGAATACA GTTCTCCTCA CACGAGAATT 
    TCATCCAACG CGGAAAGACC GGTAGAATCC CGAAAAATCT CGAATCAGAT 
    AATTTAAAAC AGTATGCAAC CCTACGATAC TTTCCAGATG GAATACGAAA 
    CTGCTATGAT CTAAGGGTGG AAGAAGGGAG GAACTACCTT ATTAGAGCTA 
    CATTTTTCTA TGGAAATTTT GACGGGCTTA ATGTTAGCCC TGAATTCGAT 
    ATGCATATCG GTCCTAATAA GTGGACCACA ATAGATTTGC AAATAGTGCC 
    AGATGGTACA GTGAAGGAGA TCATTCACAT TCCAAGATCA AACTCTTTGC 
    AAATTTGTCT TGTTAAGACA GGGGCAACTA TACCAATGAT ATCAGCTTTG 
    GAATTACGAC CTTTGGCGAA TGATACTTAC ATCGCTAAAT CTGGTTCCTT 
    GAAATATTAT TTTCGCATGT ATCTTAGCAA TGCCACCG

AT3G46330.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
maternal effect embryo arrest 39 (MEE39); FUNCTIONS IN: kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46400.1); Has 157192 Blast hits to 122633 proteins in 4636 species: Archae - 101; Bacteria - 13531; Metazoa - 44718; Fungi - 9899; Plants - 69914; Viruses - 393; Other Eukaryotes - 18636 (source: NCBI BLink).
Link
InterPro Scan - TAIR