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GT18054

CSHL Arabidopsis genetrap mutant lines

Original: GT18054

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18054

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2984109 [Map]; Strand: c
      • AT5G09620.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18054 - 5-prime edge 
    CCTACTTTAT CCCTGCCTAC CAGAAAGCTC TGGAGAAACT TGCATAGTTC 
    TGACCAATGT ATGAACTACC CCAGGAAGGT TGAGCATTAC CAGCAAGCTG 
    CAATGGGGTT ACAACGTGGT TCAACCACAG CCAACGTTTT CAGGTGGTCC 
    ACAAGTTATG ACTAGTGTTG GTCCGCAAGT TATGACTAGT GTCGGTCCTC 
    CAATGGGGTT ACAGGAACCT TATTCACAGA TGGGGAAGCC TGTGTACTAT 
    ACGGTGGCTG GAGAAGGCAT GATGGTTCAA CCGCCACCAG CCCAGCCTCA 
    GCAGCAGCAG CAGCAGTACC AGGGAATGGG TCAACCGGTT AGTGGCATGA 
    CCGATCTCAG AACCGGACCG GATGGGAAAG TGGCGGTTAA CATGGCTGCA 
    CCACAAGTTT CAGATTCGGT GTGAGTGTGA GATTGAGTTA ACATTGAGGT 
    TAATGTTATG ATTATCCATT TCTTTAAACT TTATGATATA TGTGTAAAAG 
    TGTTTTTTTA GATCAAACTA GGAATCTGGA TTTCTGATGA ATCAATTGAA 
    GCACTTTTGA TGTTTTTATT TTATTTTATT TTGGGAAACT TCTTTCAGAG 
    TTCTGTTTTT TTAACTTTTG AAGTATGCTT TTGGACTTTT TCGTCTCCTG 
    TCTATTGTTA TGCATCTATT TA

AT5G09620.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT5G64430.1); Has 18668 Blast hits to 11149 proteins in 562 species: Archae - 0; Bacteria - 597; Metazoa - 7421; Fungi - 2059; Plants - 1927; Viruses - 138; Other Eukaryotes - 6526 (source: NCBI BLink).
Link
InterPro Scan - TAIR