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GT17743

CSHL Arabidopsis genetrap mutant lines

Original: GT17743

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17743

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23400207 [Map]; Strand: c
      • AT3G63350.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT17743 - 5-prime edge 
    CAAGAAACCT TCATTCATAA ACTCCCATCT CTCTGCCTCG ATCTTTCTGA 
    ATCCCTGCAG ATAAATAAGT AATCGAATAT CATAATATAA GTTTTTTTTT 
    GGTTTGCGAC GTAAACATGT TATATATAAC AGACGAAGAA CCTGCCACTC 
    TACTGCGCTG TAAAAGGAAA GCAACATTAT CTTCAATTTT ATATTTTGTT 
    GGATGGAATA ATTGAATATT TT

AT3G63350.1

Model type
Protein coding
Short Description
winged-helix DNA-binding transcription factor family protein
Curator Summary
member of Heat Stress Transcription Factor (Hsf) family
Computational Description
AT-HSFA7B; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root, pedicel, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A7A (TAIR:AT3G51910.1); Has 2113 Blast hits to 2100 proteins in 228 species: Archae - 0; Bacteria - 6; Metazoa - 325; Fungi - 481; Plants - 785; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).
Link
InterPro Scan - TAIR