1. Home
  2. Mutant Lines
  3. GT17585

GT17585

CSHL Arabidopsis genetrap mutant lines

Original: GT17585

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17585

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21503595 [Map]; Strand: w
      • AT3G58060.1 - [+] show detail - Cation efflux family protein
        Distance: -3919; Region: intergenic
      • AT3G58070.1 - [+] show detail - C2H2 and C2HC zinc fingers superfamily protein
        Distance: 3018; Region: intergenic
    Flanking Genome Sequence: GT17585 - 3-prime edge 
    AGAGGTATTT TACCCGACGT TACCGACCGT TTTCATCCCT AGACTACAAC 
    TATATCCGAC CGTCACGGTG CCGACTTAGA CCGTCGCAAG TACTATGGTG 
    ATTGCGTACG ATATTCGGTA GAAGAAAGGG ACACGTGTGG TTCTGTGTTC 
    AACCCGACCG GATCGTATCG GTATATTCAT CTCACTCGAC AATCGCCGTC 
    CCTTGCCAAA TTCTGAAACC GGTTTACTAA TAAAAATCCG ATGTAGACCC 
    ATAAAAGCCC AATTAAACTG TTCTGTCTTC TTATTTGGGC CTACCTAATT 
    CATGAAGTTC GCCAAACCCC TATGTAGGCC CATAAAAACT ATTAATTAAA 
    TTGTTTTGTC TCTTATTTGG

AT3G58060.1

Model type
Protein coding
Short Description
Cation efflux family protein
Computational Description
Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G58070.1

Model type
Protein coding
Short Description
C2H2 and C2HC zinc fingers superfamily protein
Curator Summary
Putative transcription factor, contains C2H2 domain, regulates aspects of shoot maturation in Arabidopsis thaliana. GIS loss-of-function mutations affect the epidermal differentiation of inflorescence organs, causing a premature decrease in trichome production on successive leaves, stem internodes, and branches. Overexpression has the opposite effect on trichome initiation and causes other heterochronic phenotypes, affecting flowering and juvenile
Computational Description
GLABROUS INFLORESCENCE STEMS (GIS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, trichome branching, response to gibberellin stimulus, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 8 (TAIR:AT2G41940.1); Has 936 Blast hits to 936 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 934; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR