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GT17020

CSHL Arabidopsis genetrap mutant lines

Original: GT17020

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17020

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 265702 [Map]; Strand: w
      • AT2G01580.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
      • AT2G01590.1 - [+] show detail - chlororespiratory reduction 3
        Distance: -928; Region: promoter
    Flanking Genome Sequence: GT17020 - 3-prime edge 
    GGTAGAGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTGAGCAACA 
    CCAGCCATTC AACTACTTCA ACCACGAGTG TTCATGTTAC GGCTCTCGAT 
    GGGATTGTAA GTGCTAATTC TCTCTTCACG GTTGCAGTCT TTGTCGGAAT 
    CTCCTTCGAC CAGCCAAGTG ACCTCACCCT CACGGACAGA ACAGAGTGCA 
    GTGCAGGACG AGACGTGGAA CGTGACCTGG TTGTGTTTGA AGTCATCTCA 
    TTTGCCTTCA TCTCACTCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 265764 [Map]; Strand: w
      • AT2G01580.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01590.1 - [+] show detail - chlororespiratory reduction 3
        Distance: -866; Region: promoter
    Flanking Genome Sequence: GT17020 - 5-prime edge 
    CTTTCTCCCT GGTGTTGCTA TTGCTATTTT GGTTGCTGCT CGTCTCTATG 
    TCGGAATCTG CCATTACCAA TGAATGGATC TCTCTTTCTT TCTTTTTTGG 
    GATAGCTAAA AGCTTCTTTC TAATGGTGGA TCATAATCTT CTGTTGTGTT 
    CTTATGATTC CCTTTTGAAT ATGATTTGGT AATGTTGTTT AAGAGTGGGT 
    GGTGTTTGGT TTAGAACGAT TAGCCTTTTG GAAAACGATA GCTCTATGTT 
    AATTGATAAT TTAATCTTTT TCAAGTCTTG GAAGGTACAC ACACCTTTCT 
    CCTTTTGTTA TGAAAGAAAA TGGTTTCTTC TAGTAACCAA AATTTTGAAC 
    TTTATTCACA TGTAAAACAA CACAATCTTG TAGCAAATTT ACACGTTAAA 
    TTTAAAACGG TGTTGCGTAT TTGAAGAGAC AATATCCTAA ACGTTATCAT 
    ATTAATATTA TTTTTGTTAT TTTTCCGTCA AACACCATTT TTATTAAGTT 
    ATCGAAAAGA TATTATCCGT TAGAGAAAAC TATTAAGGAA CCGACGTGCT 
    TACATGAGAG AAAATAACAT TTCCAGTTCT AACTTTTATG GCTAAAAGGT 
    CTGCTCGAGT GTTAAATTTT CGAGAAAAAA ATCTAATACG AAAAATAGGA 
    AAATACAATA AGAGACCGAA AAAGAGGCGA ATTCCGCTGC AAAAGTTGGC 
    CAATCTTTTT GGTTATCCAG AAGAGATATC AAATCGGAGC ATAGTAATAT 
    TATTAACTTT GTTTTAACCT AGCGATGTGG GATAAAAATC C

AT2G01580.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01590.1

Model type
Protein coding
Short Description
chlororespiratory reduction 3
Curator Summary
Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.
Computational Description
CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR