Home
Mutant Lines
GT16588

GT16588

CSHL Arabidopsis genetrap mutant lines

Original: GT16588

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16588

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 3387479 [Map]; Strand: c
- AT3G10820.1 - [+] show detail - Transcription elongation factor (TFIIS) family protein
  Distance: 0; Region: exon1 (CDS)
- AT3G10820.2 - [+] show detail - Transcription elongation factor (TFIIS) family protein
  Distance: 0; Region: exon1 (CDS)

AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTGGCC 
AAAGGAGTTT AAATCCAGGA GAGATAGAAT TGCTGAGCTT CTCTTCTCTT 
GTAAAGTGAG TCGCTGCATT GGTTGTGACC ACCTTGAGCT CTCGATAGCT 
GGAGACGAAG CGGCGGTGGA GATAGTTGGA GTTGGCGGCG GCGGTGATAG 
GGGTGATTCT GGTGTTGCGA CGGGTGAAGG TGAAGAGGCG TCTGTGAGTG 
TTGATGAGGT TATGAGGATC AGAGATATCT TGTCGAACAA AGACGATGAG 
GTTTTTAGTC TCTTTGCTTG GATTACATTA AAACTTGTGC TAATTCATTG 
GTTAAATTTG GAATCTTTGT GTTGATTGTT GAGTTTTTGG TTTCTGTCAT 
CTTTTTTGCA GAAAGATTCT GTGTTACTCG AATCTCTGAG AAAGCTTGAG 
TCAATGTCTA TGAGTGTGGA CATTCTTAAG GTTTGTTTTT TTGGTGTTGT 
TTTGATATTG TATGATTTGG TGTAAGTGGG AAGTTGCTTA TTCTGATGGA 
GCTTTTCGAG GCTGTGGAGT GATTTAAGTG TTTACGTTCT TGCAGGATAC 
TGAAATTGGA AAGGCTGTTA ATGGTCTGAG GAGACATAGT TCCGATAAGA 
TTAGCAAACT TGCAAAGACT CTTTTCGCGT ATGAGTTTCA TCATTCTCAT

AT3G10820.1

Model type: Protein coding
Short Description: Transcription elongation factor (TFIIS) family protein
Computational Description: Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT5G05140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G10820.2

Model type: Protein coding
Short Description: Transcription elongation factor (TFIIS) family protein
Computational Description: Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT5G05140.1).
Link: InterPro Scan - TAIR