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GT16126

CSHL Arabidopsis genetrap mutant lines

Original: GT16126

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16126

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26171505 [Map]; Strand: w
      • AT1G69580.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -438; Region: promoter
      • AT1G69580.2 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -438; Region: promoter
    Flanking Genome Sequence: GT16126 - 5-prime edge 
    CCTACTTTCT CCCTGTTCCC AGACAATTAT CCACCCATGC AAACGTATTT 
    TTAAAAATGT TATATGGTAT AACGTAACAG TACTGCTACT TATACGGATC 
    GTGCAAAATC CTGAAAGGCC AACAAAAAAA CATTTTTACA TAACATGAGA 
    AGAAAGTAAC ATAGAGGACC ATATTAAAAT AGGTGGTAAT AATTGCAAAC 
    AAAGAATTTC ACTTGCACAT ACGATATGTG TCCATTAGGA TTGATCGATG 
    TCTATACGAC CAAAACCGAA GTGTACAAAC CTTTTTTTTA TCTGATCTTA 
    TTGCCTCATA TATGGAAGAA AAAGGTAACA CCAATTTACA AAAAGGCAAC 
    AAATAACAAG GAAAAA

AT1G69580.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1694 Blast hits to 1678 proteins in 70 species: Archae - 0; Bacteria - 6; Metazoa - 10; Fungi - 0; Plants - 1653; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G69580.2

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04030.3); Has 1687 Blast hits to 1671 proteins in 68 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 0; Plants - 1652; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR