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GT15367

CSHL Arabidopsis genetrap mutant lines

Original: GT15367

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15367

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 266698 [Map]; Strand: c
      • AT2G01580.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -793; Region: promoter
      • AT2G01590.1 - [+] show detail - chlororespiratory reduction 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15367 - 3-prime edge 
    TTTTACCGAC CGTTACCGAG CGTTTTCATC CCTAGGTGTT ATCCACCATC 
    TACTCCATCA CCAGAGCTTC AACGCCTACT ATGGCGTCTC TAACTAATGA 
    CTCACCGTCT CCACTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 266631 [Map]; Strand: c
      • AT2G01580.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -726; Region: promoter
      • AT2G01590.1 - [+] show detail - chlororespiratory reduction 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15367 - 5-prime edge 
    TCCTACTTTC TCCCTGATAA CCCGCCATTG CCTCCTCCTT CTCTTGTGTG 
    GTTTAAAATA TTTTAGTCAA AGAGGATTTC TATGTTTCAT CCTCTTGAAT 
    TCTCCAGCCA ATTAAAACTT GAGAACAGGC CACGTCAGCT AAGACTGTCT 
    TTTTAATCTT GAGGACATGC CAATTTTTGG ATTGATGACG TCATTGATTG 
    TTTGTCTTTG TTAAGAGGAT TTTTATCCCA CATCGCTTAG GTTAAAACAA 
    AGTTAATAAT ATTACTATGC TCCGATTTGA TATCTCTTCT GGATAACCAA 
    AAAGATTGGC CAACTTTTGC AGCGGAATTC GCCTCTTTTT CGGTCTCTTA 
    TTGTATTTTC CTATTTTTCG TATTAGATTT TTTTCTCGAA AATTTAACAC 
    TCGAGCAGAC CTTTTAGCCA TAAAAGTTAG AACTGGAAAT GTTATTTTCT 
    CTCATGTAAG CACGTCGGTT CCTTAATAGT TTTCTCTAAC GGATAATATC 
    TTTTCGATAA CTTAATAAAA ATGGTGTTTG ACGGAAAAAT AACCAACATA 
    ATATTAATAT GATAACGTTT A

AT2G01580.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01590.1

Model type
Protein coding
Short Description
chlororespiratory reduction 3
Curator Summary
Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.
Computational Description
CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR