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GT15210

CSHL Arabidopsis genetrap mutant lines

Original: GT15210

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15210

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24045339 [Map]; Strand: w
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: GT15210 - 5-prime edge 
    TCCTACTTTC TCCCTGGCTA CAAGAGCTCT TGATCTGGCA ATGTCATGCG 
    CCGATTCTTC TTCCTCAAAA CGACCATCGA TTTCTGAGGT TATTCAAGTG 
    CTTAAAGAAT GTATCTTGTG TGAAAACTCG AGGATACGTA ACAATCGAGG 
    TTTGGAATCA GAAGACATGA ACGTTGACTT GGACAGTTCC GAGACTCTCA 
    TGGCAAGATA GTTTTGAGTG TTGTCTCTTA TACTCAGGAT TTGAAAGTTT 
    TCTTTTGGCT GAGATCATTG ACAAGTCCAG ATCATATCCT CGTTCTTTTG 
    GAGAATTTTT AGTTTCAAAT ATCTCTGTTA TTTAGTATCT TTGTATGCAG 
    TTACTCTTGG CTCCGTTTGG ACATTTTAAT TTGAGAAAAT TGCCTATGAA 
    GACATTCCAT TGATAATTTC TTTCGGATAT ATCTTAGCAA TTCAAAAATT 
    TATCTAAGGT AACTCAACTT TTGCTCAACA TTTGGTCTCT TGTGTTCTGT 
    TTTGATCTGC TT

AT5G59670.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR