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GT13064

CSHL Arabidopsis genetrap mutant lines

Original: GT13064

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT13064

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 266122 [Map]; Strand: c
      • AT2G01580.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -217; Region: promoter
      • AT2G01590.1 - [+] show detail - chlororespiratory reduction 3
        Distance: -508; Region: promoter
    Flanking Genome Sequence: GT13064 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCGTAGAAGA 
    GACAATATCC TAAACGTTAT CATATTAATA TTATTTTTGT TATTTTTCCG 
    TCAAACACCA TTTTTATTAA GTTATCGAAA AGATATTATC CGTTAGAGAA 
    AACTATTAAG GAACCGACGT GCTTACATGA GAGAAAATAA CATTTCCAGT 
    TCTAACTTTT ATGGCTAAAA GGTCTGCTCG AGTGTTAAAT TTTCGAGAAA 
    AAAATCTAAT ACGAAAAATA GGAAAATACA ATAAGAGACC GAAAAAGAGG 
    CGAATTCCGC TGCAAAAGTT GGCCAATCTT TTTGGTTATC CAGAAGAGAT 
    ATCAAATCGG AGCATAGTAA TATTATTAAC TTTGTTTTAA CCTAAGCGAT 
    GTGGGATAAA AATCCTCTTA ACAAAGACAA ACAATCAAT

AT2G01580.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01590.1

Model type
Protein coding
Short Description
chlororespiratory reduction 3
Curator Summary
Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.
Computational Description
CHLORORESPIRATORY REDUCTION 3 (CRR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR