F10201

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F10201

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F10201

Determination of introduced cDNA(s)

  • RAFL09-64-J10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-64-J10 - Resource: pda08596

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-64-J10 - full reading 
    AACCCTCAAA ATCACAATCT TCTCTTACAA AAAACTTTGA AAGATGAAGA 
    TTCTTCTAGC ATCATTGTGT TTGATCAGTC TTCTCGTAAT CTTGCCTTCT 
    GTCTTCTCTG CTTCTTCTTC CTCTGAAGAT TTTGATTTCT TCTACTTCGT 
    CCAACAATGG CCAGGATCAT ACTGTGACAC ACAGAAGAAG TGTTGTTATC 
    CAAATTCAGG CAAACCAGCT GCTGATTTTG GCATTCATGG TCTTTGGCCT 
    AACTACAAAG ATGGAACTTA TCCATCTAAC TGTGATGCCT CTAAACCATT 
    CGATAGCTCA ACGATATCAG ATCTTCTCAC TTCAATGAAG AAGAGCTGGC 
    CAACACTGGC TTGCCCAAGC GGTTCAGGTG AAGCGTTTTG GGAGCACGAA 
    TGGGAGAAGC ATGGTACTTG CTCTGAATCG GTTATCGATC AACATGAATA 
    TTTCCAAACC GCTCTTAACC TTAAACAGAA AACCAATCTC CTTGGAGCTC 
    TAACCAAAGC CGGGATTAAT CCGGATGGAA AATCTTACTC TTTGGAGAGC 
    ATAAGAGATT CGATAAAAGA GTCAATTGGT TTCACTCCTT GGGTTGAGTG 
    TAACAGAGAT GGTTCTGGTA ATAGCCAATT GTACCAAGTC TATCTTTGTG 
    TTGACCGGTC TGGTTCCGGT TTAATCGAAT GTCCGGTTTT CCCACATGGG 
    AAATGTGGAG CTGAGATCGA ATTCCCTTCT TTTTAGTTTC CAATTTCTAA 
    ATTCAGTCTC TTGAACCGGC ATCGATCTTT TGTTCATGGA GATTGGTTTG 
    GTCAAAAAGA AGATTTAATG TAATAAAAAT TTATGGGATA TTGGATAATG 
    ATATAGTTCA ATTTCAATAA TATTCTACGT T

    Gene models with high sequence identity

    1. AT2G02990.1 [+] show detail - ribonuclease 1
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Ribonuclease T2 8.7e-65
    HMMPanther RIBONUCLEASE T2 1.2e-91
    HMMPanther Ribonuclease T2 1.2e-91
    Coil coiled-coil 0
    superfamily Ribonuclease T2 5.2e-76
    PatternScan Ribonuclease T2, active site 0
    PatternScan Ribonuclease T2, active site 0
    HMMPfam Ribonuclease T2 1.2e-60

    See the detailed result >

    AT2G02990.1

    Model type
    Protein coding
    Short Description
    ribonuclease 1
    Curator Summary
    member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.
    Computational Description
    ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR