Home
Mutant Lines
ET14162

ET14162

CSHL Arabidopsis genetrap mutant lines

Original: ET14162

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14162

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 39329 [Map]; Strand: c
- AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
  Distance: 0; Region: exon1 (CDS)

ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
AACCCGTAGA CAGAGCTAGA GGAAGCCCAG ACAATGGCGG GTTGGGGATT 
GGCAGATTTG CAAACCTCAA GGAGATTGAC GAAGCCAGCG ATGTTACTGT 
GAACATAAGA GCTAGGATTT TCCATGGCGT ACCTGACACC AGCTTGAGCA 
GCCAAATGCA TAACGTGGGT AAAGGGAACA ACTTCAAAGA GCTTCTTCAA 
GAGAGCAGCG TCATTGATGT CTCCTTCAAC AACAAACACT CCGCTTCTCT 
CCAAAAGGGC TTGCCTTGCT CTCTTGAGCG ATGGATCGTA GTAATCGTTG 
AAGTTGTCAA GCCCCAGAAC GCCATCTCCG CGGCGTTTGA GAGCGGCGGA 
GACATGGGTA CCGACGAAAC CGGCGGCTCC GGTGACGAGA ACAGAGAAAC 
CGCGGCGGGT ACGGAGACGG GCGGAGGATC TGACCCGTTT CTCCCAAGCG 
GGTCCACCCC AGGAGTAGGT ACGAAGAGAA CGGCGAGAAG GATCGGCGGG 
ATTGGAGGAA ACGGGAGATC GGTAGAAGAA GATGAAGATC AAACCAACGA 
AGACGAGAGA CCAAAAGGCG AGCTTGGCGA CGGAGGATTG CCACCGCGTA 
CGGTGGAAGT AGGGCTTGAA CTTGTCAGGC GTCGAAGGAA TATCATCAAG 
ATGCGACATT TGCTTCATAT TTACCTCTAC AGAGAGAATC TTCTTC

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 25568673 [Map]; Strand: c
  - AT5G63890.1 - [+] show detail - histidinol dehydrogenase
    Distance: -650; Region: promoter
  - AT5G63890.2 - [+] show detail - histidinol dehydrogenase
    Distance: -467; Region: promoter
  - AT5G63900.1 - [+] show detail - Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
    Distance: -25; Region: promoter
Flanking Genome Sequence: ET14162 - 5-prime edge
```
CCTGGACTTA AATCTGCTTC CGTCGGAACA ATATCACACG AATTCATATC 
TTCAAGGAAA CACCACTCTC GCTTATCGAC TAGGGTTTTG AGGCACATAT 
AAGGTTCGAG AAAAATGAGG AAATTTTCCC TTAAACAAAG GGAACAAATC 
TTATAAAGAT TTTATCAGTT TTAAATCTGT TGAATATTTT TTCCAAATAT 
TAAATTAAAA AAATGGAAAA CGTGATGCGA AAGTATCTGG AAAAATAGAA 
ATTTGATTAG AATGTTAATT CCTATACATT AAGAAGTACG TGGGCCTTTG 
GATCATAAAC GTTT
```

AT4G00110.1

Model type: Protein coding
Short Description: UDP-D-glucuronate 4-epimerase 3
Curator Summary: Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description: UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G63890.1

Model type: Protein coding
Short Description: histidinol dehydrogenase
Curator Summary: Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.
Computational Description: histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9090 Blast hits to 9090 proteins in 2188 species: Archae - 179; Bacteria - 4137; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4487 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G63890.2

Model type: Protein coding
Short Description: histidinol dehydrogenase
Curator Summary: Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.
Computational Description: histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G63900.1

Model type: Protein coding
Short Description: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
Computational Description: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: leaf lamina base, leaf whorl, flower, leaf, seed; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger transcription factor, putative (TAIR:AT5G58610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR