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54-2884-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22859519 [Map]; Strand: c
      • AT5G56450.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2884-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTGAA TGTTTGATTT TATCTTCCGT ACTGTTAGAG 
    AAGAAGGTGT TTTATCTTTA TGGAGAGGCA ATGGAAGCAG TGTGCTCCGT 
    TATTATCCTT CTGTTGCTCT TAATTTCTCT CTTAAGGATC TATATAGAAG 
    CATTCTTAGA AACAGTAGCT CTCAAGAGAA TCATATCTTC TCTGGTGCAT 
    TAGCTAATTT CATGGCTGGT TCTGCTGCTG GTTGTACTGC TTTGATTGTT 
    GTTTATCCGC TTGATATCGC GCATACTCGT TTAGCTGCTG ACATTGGGAA 
    GCCTGAAGCT CGTCAGTTCA GAGGAATCCA TCATTTCTTG TCAACGATTC 
    ATAAGAAAGA TGGGGTTAGA GGAATCTATA GAGGCTTACC TGCGTCTCTA 
    CATGGTGTGA TTATTCACCG TGGCTTATAC TTTGGAGGGT TTGATACAGT 
    TAAGGAGATT TTCTCAGAGG ATACTAAACC TGAGTTGGCA TTGTGGAAGA 
    GATGGGGTTT GGCTCAAGCT GTGACTACAT CTGCTGGTTT GGCTTCTTAC 
    CCGTTGGATA CAGTTCGTAG ACGGATAATG ATGCAATCCG GGATGGAGCA 
    TCCGATGTAC CGTANCACAT TGGATTGTTG GAAGAAGATA TATAGGAGTG 
    AAGGGTTGGC TTCNTTTTAC CGTGGAGCAC TCTCTAATAT GTTTANGANC 
    ACCGGTTCGG CTGCTATCTT GGTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22859576 [Map]; Strand: c
      • AT5G56450.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2884-1 - 3-prime edge 
    CTTTAAACCT TCTCTTCCCT GCGTGACCTT CGTCTCCAAC GATTGCGATA 
    TTGCTCTCTT GTGTCTGCAA TAAAAGCT

AT5G56450.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Computational Description
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR