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54-0821-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19462959 [Map]; Strand: c
      • AT2G47430.1 - [+] show detail - Signal transduction histidine kinase
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 54-0821-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA TTCATGTATA TTTATTGAAA AATATAGGCA 
    TTCCTGGTGG TTGTTTTCGA GTGCATTTGG ATCTCAAATT GGCGAACAAC 
    AACGGAGAAC CTAGTCAAAG AGGTCGCTTC ATTTACCGAA GATC

AT2G47430.1

Model type
Protein coding
Short Description
Signal transduction histidine kinase
Curator Summary
Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte.
Computational Description
CYTOKININ-INDEPENDENT 1 (CKI1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 1 (TAIR:AT2G17820.1); Has 89821 Blast hits to 76986 proteins in 2917 species: Archae - 765; Bacteria - 78909; Metazoa - 25; Fungi - 2111; Plants - 1771; Viruses - 21; Other Eukaryotes - 6219 (source: NCBI BLink).
Link
InterPro Scan - TAIR