1. Home
  2. Mutant Lines
  3. 54-0110-1

54-0110-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24048798 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 54-0110-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA TATTATATTC TCTCTTGTTA ACTTTAGGGA 
    CTTGTCGAAT AATACCTTGA CCGGAGAGGT GCCAGAATTT CTAAGCAACA 
    TGAAATCGCT GTTGGTCATG TAAGTTTCTC GCAAAAACAT ATTTTCCAAA 
    ATGCNTTTTC ACATTCCACC TTGGATCATG TTCATGCATG TATCACAATT 
    TCTCTTTTTT TTTGCAGAAA CTTAAGCGGG AACGATCTTA ACGGTACAAT 
    TCCTCAATCT CTACAAAGGA AAGGACTTGA GCTACTGTAA NAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24048789 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 54-0110-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    ATTACATAAC ATTTTTTTTT TGCNTNCCCG TAACATTTGA TCAGCANCAA 
    NACATACTTA CAGCTTTTNT AGNGNCGNAA NATTTTNAAN GGCAGCTGNT 
    NTCNGTTCCA GTTAAACCAC TTGATNACAA GTTTCNGGGG AAATTTCCAA 
    AACCATNTTC AANAATNTNA TCATGATCNC TTNTANATCC TGANGNGTNT 
    NCTAGGGAAC TAANGGCTTA CAAAGTAGGG ATTNTNGGGG GNGGGGTTNT 
    NTNTGGGANG CTGCAGTTNA AACCATCCCN CATAAACNGT NGNGGGACCC 
    ANGGATCGCT TTGCCAGTNG ATTNTACTCA ATTNATAGGA AGCTACCANC 
    CCGGGCCGNN NACCACCGGG CCCCCTTNAA A

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR