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53-4396-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24270290 [Map]; Strand: c
      • AT5G60320.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: -518; Region: promoter
    Flanking Genome Sequence: 53-4396-1 - 5-prime edge
    CNNGATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC CATAGCCTCA AGTTGTTACC ATGGATCACA
    GAGAATGTTG CTGTGGATAA TCGCTAAACA GACGGTTAAA ATCTTCAGCA
    AAACAAAGAA TTTAAGGGAG AACAAGATGA TACAGTTATG AATGATTACA
    GTACCAGGGA GATGACTAAA AGTCTACCAA TTACTTTTCT AGGAAATTGG
    ATAACTGTTA GTTTCTTGTA TTGGTTAGGA CAAGTGAGAC AGATAAAAAT
    CCTGAGACCT AATAATATAT ATGCTTTCTG CTACGTGTAC ATTGGGTGGG
    AGTNCTTAGT TTTCCANTGG GTGTNCCCAT TAAGGTGAGT TAGNGGCCNA
    CGAAGCAGCT GACCAGCTCC TTGAAGCTAC TNNGGAGGCT GCATCAATCA
    GAACCGNGGN GNGATTGCTA ATCCCCACAG AGTATGGTGA GATATCTNGC
    CATGGTAGGT NNNGGAAAAA AAATAGGGAN GGNTNGCTNC ATTTNNGGCN
    NGAAAAAANC ACTTTTTTTG GGNNGAGGGA NCGAGTTTNT TNNCNGNNNG
    ANTNCCNCNA NANANCNCCC NCCNACCNGG GGGGGNTNNN TNNNCNAANG
    GGGGGGGNNN NNNNNANAAA AAANTTTTTN NANNAAAAAN AA
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24270294 [Map]; Strand: c
      • AT5G60320.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: -514; Region: promoter
    Flanking Genome Sequence: 53-4396-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
    GTCTACGTTA TTGTTTTGGT CTGATACCAA ATTCATTACA TGAGTCATCC
    CTTCCTTTTG GCATCGTTGA CTTCAAATGC TTTGATGATG AAACTTATTT
    AACATGTGGA TAATTGAATT TAAATTTTAT TTTTTTGGTC AATATGAATT
    ACATTATTAT CATATAAGAA GAAATCCTTT ATAAATGTGA TTGACAGTCT
    GATACACATG GTTATAATAC ATAAGAAAGA TATCCAAAAC AATAGTATTT
    TGAGGCTATT ATGACATACA TTGTTAGAAC CAGACAAGAG ACCATATAAT
    TATTGTATTG AACAACAACA TAAAATAACT GGTTTGAAGT TATTGTCATG
    GTTACATTTA ATCAATTTCA TTTTGTATAT TCAACTCAAG AGATGCCTCT
    AGGAAATACA TTTCCTGAAG ACAATTGAAC TTGGAATGTT GAAACTTGTG
    TTTGAAGATA AATTTGCATT TTGAAACTCC AGAAACAAAA CCAGACTTCT
    CTCTGTTTCA TTAGCAATGG CTTCTGAAAG ATTGCATCTG ATCTTATTGG
    TCTTCTTTAA TCATCTGACT TTCTTGTTAA GTCAACAAGA AGAAGCCGGT
    TTCATCTACA ATGGCTTTGG CCAAGCTCAA GCTGGTCTTC ATCTAGACGG
    AGCTGCTAAA ATCCTCTTTC CAGATGGATT GTTGCAGTTG ACAAATGCCT
    CACACAACAA AATGGGTCAT GCT

AT5G60320.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin protein kinase family protein
Computational Description
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G45330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR