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53-3434-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10770556 [Map]; Strand: w
      • AT1G30455.1 - [+] show detail - transcription regulators;translation initiation factors;zinc ion binding;tran...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3434-1 - 5-prime edge 
    CTTTTCGAAG CTTCTAAAGC AGCGGCGGCG AAATCTAGAA AAGATAAACG 
    ACAACAACGT GCTGAGGAAG AAAAGAACGC GCCTCCTCCA GCTACAGCCA 
    TGGAAGCTGT TGATAGCATG GTCAAGAGAA AGAAATTTCC CGATACTAAC 
    TGCGATTATT TGGAGGAGCT TCTTGATACT TCAGCTCAGA AAGCATCCAA 
    GAGATTGAAA ACCGAGACAG TGATGGAGAA GAACAAGGAA GAGCATGAGA 
    TTGTTGAAAA CGAACAGGAT GAAGAAGATT ACGCGGCATG AACACAGATG 
    AGAAATTCTA TGAAGGCGTA GTGGAAGAGG ACGAGGAAGA GGGTGGTTAT 
    GATTTTGGAC TGTATTAATT AAACTTTATA TTAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10770440 [Map]; Strand: w
      • AT1G30455.1 - [+] show detail - transcription regulators;translation initiation factors;zinc ion binding;tran...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3434-1 - 3-prime edge 
    TCGAAAAGGT TGCTTGCATT ATTGCAAGCG TTTAAAGCTG CTGCTTCCTT 
    CTCATCATAT CCGGGGTTTT CGTGATCAAA GATAATCTCA ACCAGGTGCA 
    CTTCTTTCGG GTTCCGAAAA TAACAATCCA ACTCTCCATT ATCGAGGTCA 
    GACAAAGTGC TTGATTCATC CGAATTTTGT TGTTTGTCGT TTTCTTCTGT 
    AGAAGCTTTG ATGGTGTATC CAAAGTCCAT ATGAGTCTTT GGCTTTGTNT 
    CTTCTAACAA GGAAACACTA CTTAAGCTTN TNNGANCCGG TTGCGNTTNN 
    AGTTCTTATA CTNAATCATA CTCATGACAT CTAGTCATAT TCGACTCCAA 
    AACACTAACC AAACTTCTTC TTNGTTNTGA AAGCT

AT1G30455.1

Model type
Protein coding
Short Description
transcription regulators;translation initiation factors;zinc ion binding;transcription activators
Computational Description
transcription regulators;translation initiation factors;zinc ion binding;transcription activators; FUNCTIONS IN: transcription regulator activity, transcription activator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, positive regulation of transcription, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT2G45100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR