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53-3200-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24015977 [Map]; Strand: c
      • AT5G59613.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT5G59613.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 53-3200-1 - 5-prime edge 
    TTCAGATGGC TTAGAATTTT ATTGTAATTC ATGATTTTGA TATCTGGTTT 
    TCTCCAATAG CCTGTACAAA ATCTCAATGT GTGTAATGTT TGATTTGTCT 
    TGCATCTGTT TCTTGAGCCA GTTTGGTTCT GTATATATGG TAATGCTTGA 
    TGCATTGTGA GCCATACATG AGTTTCCAAC ATCATTCAGA TTAACTAAGT 
    GTGTTTGATC AGACTCTCGT AATAACAAGA TTTGAATCCT TGATAGATTT 
    AGGATTTCAC AGGATTCCAT AACACTTACC ATTCTCTATG TTTGTTCATG 
    TNCTGCTGCG AAATCTCAGG TGATCTACTG ACGTGAGTTG TCGAAGCTGA 
    GAAGCCGAAG CGTTCTTATG GAAACTACTG AGAGTGCTTC AGCTTTCAAA 
    CCTGTTCTAA TAACATGAAA GAGAGGATTA TAGACACTAT CAATCTCTCG 
    TTTCCTTTTC TCTGTGTTTT CACAACTCTT GAACAGTGCA AATTCTACTC 
    TG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24016068 [Map]; Strand: c
      • AT5G59613.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT5G59613.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 53-3200-1 - 3-prime edge 
    TCTGAATGAA GTAGGTGACT TAATAAGATT CAATTAACAG ATGCAGAGAA 
    ATCACATACA TTTTCTAAAT TCATCTTCCA AATCGTAAGC TAACATTGAA 
    AAAATCCAAA ATCAGATACA AATGATATGA TCGAAAGAGA AAGACATTAC 
    CGCCTGTGTT GTTGGACAAA CTTGGAGTTC TTGGCGTCTT CCTCTGCAAA 
    ATGAGTCAAT ACATTTACTA ATTAGGGTTT CACAACCAGC GATCCAACAA 
    TCAATACTGA GACACAATAC ATCAATATAT CCGATCCGAT TCCACAAATA 
    CGGATCAATT GAGGATTAGC TCTTTCATCT C

AT5G59613.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59613.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1).
Link
InterPro Scan - TAIR