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53-3162-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24046232 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -560; Region: promoter
    Flanking Genome Sequence: 53-3162-1 - 5-prime edge 
    AACATTATCT CCCTTTTATT CTTCTTATTT CTCTCATGGT GAAGTTGCAT 
    TAGAAAACAT CTTTTGGTCA TTATGCATCT TGTTTAAGCT CAAAGGCTAA 
    TTGTTTATTT TCTACNTGAC CTACTTTGAC NTTGGTAACA TTTAGTCAGC 
    ATATATATAT CATGATCATT CTGTGTCTAA TGCTAAATAT TGTTGTTGTA 
    GGCTCTAACT TTTATTCATC TCCCTCGACG A

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24046094 [Map]; Strand: w
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -698; Region: promoter
    Flanking Genome Sequence: 53-3162-1 - 3-prime edge 
    AACACTATCA TGTACATCAG TCTAGTTTTT AGTTTCCTGG TCAGACAATA 
    TATGCAACTT GGTTTTAGTA TAACTTCCAA AGACTGTATC AATCACGCAA 
    CAAAGATATT GGCCTTAATA AGCCACTAGA CTCACAACAC CATGACAACA 
    TGAAGAAATT CTGAGAAATA GTCAATGGTC GTTGACTTTT TGATTGGTGA 
    AGACAACCTC TCCAACAACT ATTATCATTC AGAGCTCCGT AATCAGAAAC 
    CATAATAAGT AAAAATGTTG GAACTTTTAA TGAAATGAGT TGCATAAGTA 
    TCGAAGTTTT AAACAGAAAC CTGTTTTGAT GACCCAGTCA ACAGCACGCG 
    ATTTTCCGGT GATAAAACGA CCATCTACGG CGGCCAAACC TCCCGACGAG 
    AGTAAGAGAA GAGCACTTCG ACTTCAGCAG T

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR