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53-2844-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24049129 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: 53-2844-1 - 5-prime edge 
    AGTTGAACCA GGGGAAATAA GCCTTGGGTT TCCTTGATAA CTACAAGAAA 
    CAAGTGTTTT TTTCTTAGAA ATCAAATGCA CAAAAGGGTT GTGGATAATG 
    GTAAAGAAAG TTCATAATAT ATGTGGGAAG CTTCTTACAG TAGCTCAAGT 
    CCTTTCCTTT GTAGAGATTG AGGAATTGTA CCGTTAAGAT CGTTCCCGCT 
    TAAGTTTCTG CAAAAAAAAA AAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24049246 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: 53-2844-1 - 3-prime edge 
    TTCAACTGAA ACCAAATCTG GCAAGAGCTT TCCAGTAACA ATAGTTGCAT 
    CAGTTGGTTC TGCAGCCATT CTTATTGTTG TGCTGGTTCT TGTACTTTTT 
    CTCCGAAAGA AAAAGCCGTC GGCTGTTGAA GGTATTTGCA AGAGAGACAT 
    ATCAAACTAG AAAAGCGATA AATCTAATGG ATTTGGTTTT TTCTAACCCC 
    TGATTTATGA TCTAACAGT

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR