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Mutant Lines
16-0477-1

16-0477-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 27155669 [Map]; Strand: w
- AT1G72160.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
  Distance: -5; Region: promoter
- AT1G72170.1 - [+] show detail - Domain of unknown function (DUF543)
  Distance: -666; Region: promoter

TTCTTCAGCC ATTTTTTACT TGTGCCGTCT TGTTCTGTGA TTGTTGTTCC 
TAAATTGGGC AAAAGTGAAT TTTGGGTTTA TAGAAAGAAA GAAAGAAAGT 
GGAGACAAAA AAATACGTTG AGACGTCGTC GTAAGTACAA AAGGGTATAT 
TGGTAATGCC AATCGAACCG GTTTTTTTAT TTTATTTTAT TTTTGTTGTA 
AAAAGATTAA TATATTTTCT CGTTTTAGCA TCAATTCCAA ATTATATATC 
AGGATTTTTG GTGTGACAAA AAAGACAAAA CAATCGTGAA ATTGGATC

3 prime edge [+] show sequence

Chromosome: 1; Position: 27155594 [Map]; Strand: w
- AT1G72160.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G72170.1 - [+] show detail - Domain of unknown function (DUF543)
  Distance: -741; Region: promoter

TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCAAC 
CTACTACTAC CACTCTCGTT ACACCGGAAA AGCTACCTTC TCCGAGCCTC 
ACGCCTTCTG AAGTATCTGA ATCTACTCAA GATGCCCTAC CGACAGAGAC 
AGAAACTCTG GAGAAAGTGA CTGAGACTAA TCCACCGGAA ACTGCAGATA 
CCACCACCAA GCCAGAAGAA GAAACCGCGG CAGAGCATCA TCCACCGACA 
GTGACGGAAA CAGAAACTGC ATCGACGGAG AAACAAGAGG TTAAAGACGA 
AGCATCGCAG AAAGAAGTAG CTGAAGAGAA AAAGAGTATG ATTCCACAGA 
ATCTTGGTTC ATTCAAAGAA GAAAGCAGCA AACTTTCTGA TCTATCTAAT 
TCCGAGAAGA AATCACTCGA TGAACTAAAA CATCTAGTTC GAGAAGCTCT 
AGACAATCAC CAATTCACCA ACACACCAGA AGAAGTCAAG ATTTGGGGGA 
TTCCATTACT TGAAGACGAT AGAAGCGACG TCGTTTTGTT AAAATTCCTA 
AGAGCTAGGG AGTTCAAGGT GAAAGATTCG TTTGCTATGC TCAAGAACAC 
AATCAAGTGG AGAAAGGAGT TCAAGATCGA TGAATTGGTC GAGGAAGATC 
TTGTGGATGA TCTTGACAAG GTTGTGTTTA TGCATGGACA TGACCGAGAA 
GGTCACCCTG TTTGTTACAA TGTCTATGGT GAGTTTCANA ACAAGGAGCT 
TTATATNAGA CGTTTTNTGA TGAGGAAAGA GGAACCNTTN

AT1G72160.1

Model type: Protein coding
Short Description: Sec14p-like phosphatidylinositol transfer family protein
Computational Description: Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 4473 Blast hits to 3903 proteins in 364 species: Archae - 35; Bacteria - 264; Metazoa - 1504; Fungi - 917; Plants - 883; Viruses - 13; Other Eukaryotes - 857 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G72170.1

Model type: Protein coding
Short Description: Domain of unknown function (DUF543)
Computational Description: Domain of unknown function (DUF543); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF543 (InterPro:IPR007512); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF543) (TAIR:AT1G22520.1); Has 92 Blast hits to 92 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR