15-2710-1 - RIKEN Arabidopsis Genome Encyclopedia
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15-2710-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24771757 [Map]; Strand: w
      • AT5G61620.1 - [+] show detail - myb-like transcription factor family protein
        Distance: -626; Region: promoter
    Flanking Genome Sequence: 15-2710-1 - 5-prime edge
    NTAAATNNNC NAGNNTCNAC TTNGANCTNA ACNNCGTTGA GANCGGATCG 
    ANTTNNATNA CAANGCAATG CANCAAAATT ATACTTGTGA ATNNATCNCG
    GGCTATATAT NCGGANTATN TATATGTAAA AACTTTGGAA GAAATAGAAA
    TATGGGTAAC TTAGGAAATA TGAGATATTA ACTAATATGG ATGAAGATAA
    AAGTAAGTAA ATTCCAGTTA TATTAAGATT AGGATTGATA TTGATAAAAA
    TATGGGTAAC TTAGGAAAGA AAATAAAAAA ATAAAATCGA ATATACGATT
    TAATATCTCT CCTAAATATC CGGGATCAAT ATCCAGTACA TGTTTACCTG
    GAAAACAATC TAACGGCTGA TTTTCCACGA ATCCTATCTT AAGAAAATGT
    TAACCGTCGA TTATGATCCT ACGCTGATTC TGCTGGATTT TTCCTTATAA
    TGACTTGGGT AAAAACTTCC AAATAAAACA AGATAATTAA GGAAACGCTT
    TATCTCTTAA GGAAAATAAA AAAATGTAAA AACNCCAAGG ACATTCACAA
    ATAACAGCTC ACGCATATCC GCATATATAT ATATATATAT ATNTCCCCCC
    NCNANAGAGG AGNGNGGGTA NTATANACNC NGGAAGGNNT TNNGTNTTTT
    TTTTTTTTNN ANACAAAATT TTTNGGNGNA AAANAAANAG NNNANAGNGG
    GGGGGNGGGN AAAAACTCNC NCCGNGGGNC CGCANGGGGN NAAACCNGGT
    TTNTNTANNA G
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24771684 [Map]; Strand: w
      • AT5G61620.1 - [+] show detail - myb-like transcription factor family protein
        Distance: -699; Region: promoter
    Flanking Genome Sequence: 15-2710-1 - 3-prime edge
    CTNTAACGGT ACAGGNATTT TACCNTCCGT TACCGACCGT NTTCATCCCN 
    ATANAGGCAC NACTTANANA GTGTNNNCAN NGACCGNATA CNCCCTTNNN
    NAANTCTGCT GNTGGTACAT GAAGTNCNAG CCCGNGCCGT CNACCGCGCG
    TGNNNTATNG ATTAGATTGA TNAAAATANN AATCTATTNG GNTCTGANTN
    CTAGATTTTT ATTTAATCTN GACTAAGATT NCTATTGCGN TNTNNATNTA
    TTAAAATANA ANAAAAAAAC ATGGTANTNN GTCNANTTGA GAGANTCCAC
    CTGNTTAATG TGTGTTTTTC ATAACNGAAA ATTNACGCTT TATAAAGNNC
    NTTANTNGCA GCATNTTTAT NNACAAAAAC CCATTTNCTA AGNNGTATGN
    NAATACNNTT CCAANTGATA AATCNTTNTT TGAANTNTTT ATANGGAACA
    ATGGAATCCC TTCAAAANAA GNNAGCACNN NNNNGCNAAN GTGTNATNNN
    NTGGAAAANG GGTNNTACNA TANNTTTGNG NNCGCGATCA TGTAGNATTN
    TGTNNTAGGC ANAANNCNNT CNAACNNGGG GGGACTATTC GGGNTGNNCT
    CTNACTAGNN TTTGGNTTNG GGCATNTANN AGNCTNANNA NTNNNATGGN
    GNACNGGAGA CGGNATGNCA ANTTTTGAAT NTNAGNANNT TTGGNCCCNN
    NCCACCTTNG NNNNCANNTT NNNTTTNNNT CCTTTTNCGC GGNCCNGGNN
    GNTNTATTAT NTNNANNGTA NNTGGCNATN CGNAANACNN ANAGANNNNT
    TGANNNNNAN GAGNAGANTN NGCCNNGANT TGTNTNNACN GGACAATGNN
    CGAGNGCCGA GGAG

AT5G61620.1

Model type
Protein coding
Short Description
myb-like transcription factor family protein
Computational Description
myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR