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15-2448-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24767540 [Map]; Strand: w
      • AT5G61600.1 - [+] show detail - ethylene response factor 104
        Distance: -110; Region: promoter
    Flanking Genome Sequence: 15-2448-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA GTTCTTGGAC TTGTTACTTA TTTTCTCTCT 
    TTAGATTTCG TCCTTTTTCT TTATTTTGTC TTTTTGTCTT ATTCCTCTAC 
    GTGGACATCT ATCATTTAAA AGTGCTTATC AAGTTATCAT GTGATTCTTC 
    TTTTAGAATT TTTAAAAATG CAATATGGAT TATTTTTAGT ATAAGTGGAG 
    TTTGATTGAG ATGTATTAAA AATTTAAGGA GTTTAAAGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24767495 [Map]; Strand: w
      • AT5G61600.1 - [+] show detail - ethylene response factor 104
        Distance: -65; Region: promoter
    Flanking Genome Sequence: 15-2448-1 - 3-prime edge 
    TCCAAGAAAA GGTAGTATGA TCTTTCTCGG TCCGATCCTC GAAACTCCCT 
    CGAAGGCTCG AACCCTCTCT TTGTTTTTTT ACCACTATAT AAGAAAGTCC 
    GATTCCTCGT CACTCTTATT CCCACTTCCA CACATACACA TATACAACAG 
    AGCAAGAGAG TCAATCAAGT AGAGTGAAGA TGGCAACTAA ACAAGAAGCT

AT5G61600.1

Model type
Protein coding
Short Description
ethylene response factor 104
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Computational Description
ethylene response factor 104 (ERF104); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G51190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR